Gene Tbd_1144 details

Gene Information

• Locus tag: Tbd_1144
• Symbol: nuoC
• ID: 3673216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiobacillus denitrificans ATCC 25259
• Kingdom: Bacteria
• Replicon accession: NC_007404
• Strand: +
• Start bp: 1197900
• End bp: 1198502
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637709828
• Product: NADH dehydrogenase subunit C
• Protein accession: YP_314902
• Protein GI: 74317162
• COG category: [C] Energy production and conversion
• COG ID: [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0133265
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGATCA CGCTGGAGTC CTTGTCCGCC TGCCTGAAAA ATGCCCTCGG TGACGCGCTC 
GTTCAGACGA TCGAGCGCCT CGGCGAACTG ACGCTCGTGG TCAAGCCCCA GGCCTACGCG 
CCGGCGATGC TGGCCTTGCG CGACCACCCG GACTGCCGCT TCGAGCAGTT GATCGACCTG 
TGCGGTGTCG ACTATTCCGG GTATGGCGAG GGCGCCTGGG AGGGTCCGCG CTTTGCCGTC 
GTCGCGCACC TGCTTTCGGT GTCGAAGAAC GCCCGCGTGC GTGTGCGCGT GTTTTGCCCC 
GACGACGATT TGCCCGCGGT CGCGTCCGTC GTGGATATCT GGCCCGCCGC GAGTTGGTTC 
GAGCGCGAGG CTTTCGATCT CTACGGCATC GTTTTCGAGG GTCACCCGGA CTTGCGTCGC 
ATCCTCACCG ACTACGGCTT CATCGGTCAT CCTTTCCGCA AGGACTTCCC GCTTTCGGGC 
AACGTCGAGA TGCGTTACGA CCCGACCCAG CAGCGCGTGA TCTACCAGCC GGTGTCGATC 
GAGCCGCGCG ACAACGTGCC GCGCGTCGTG CGCGACGAAA GCTACGGCGA CGGGCGGGCA 
TGA 

 

Protein sequence

MSITLESLSA CLKNALGDAL VQTIERLGEL TLVVKPQAYA PAMLALRDHP DCRFEQLIDL 
CGVDYSGYGE GAWEGPRFAV VAHLLSVSKN ARVRVRVFCP DDDLPAVASV VDIWPAASWF 
EREAFDLYGI VFEGHPDLRR ILTDYGFIGH PFRKDFPLSG NVEMRYDPTQ QRVIYQPVSI 
EPRDNVPRVV RDESYGDGRA