Gene Tbd_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1031 
Symbol 
ID3671256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1096321 
End bp1096911 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID637709714 
Producthypothetical protein 
Protein accessionYP_314789 
Protein GI74317049 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.608738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0254223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC TTGCCACCCT TGCATCAATT CTGTCCGCCG GCTTCGTGCT GTCCGCGCAG 
GCCGCGCCCG TGACCTACGT CATCGACAAC AGTCACACCT ACCCGCACTT CACCTACAAC
CATCTGGGCT TCTCGAACCA GACGCACAAA TTCGACAAGA CCAGCGGCAA GATCGTGATC
GACCGCGCCG CGAAGACCGG ATCGGCCGAC GTGACGATCG AGGCGACCTC GGTGAATACC
GGTTACGCCC TGTTCAACGA GCATATCCAG GGCGCCGACT ACTTCGACAC GGCGAAGTAC
CCGACGATCC GCTTCAAGGC GGACGCGATG CAGTTCAAGG GCGACGTCCC CGCGAGCCTG
AGCGGCGCGC TCACCATCAA GGGCGTGACC AAGCCGGTCA GCCTGACGAT CACCCACTTC
AAATGCCAGC CGCACCCGAT GCTCAAGGTC GATGCCTGCG GCGCCAACGC CACCACGCAG
GTCAAGCGCT CGGAATTCAA CATGGGCAAG AACGCGCCCT ACGTCAGCGA CGAAGTCACG
CTGAACCTCG CGATCGAGGC CGTGAAGGAG CACGCGCCGG CCGCCGAGTA G
 
Protein sequence
MNRLATLASI LSAGFVLSAQ AAPVTYVIDN SHTYPHFTYN HLGFSNQTHK FDKTSGKIVI 
DRAAKTGSAD VTIEATSVNT GYALFNEHIQ GADYFDTAKY PTIRFKADAM QFKGDVPASL
SGALTIKGVT KPVSLTITHF KCQPHPMLKV DACGANATTQ VKRSEFNMGK NAPYVSDEVT
LNLAIEAVKE HAPAAE