Gene Tbd_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0976 
Symbol 
ID3671199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1040896 
End bp1041405 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content63% 
IMG OID637709657 
Producthypothetical protein 
Protein accessionYP_314734 
Protein GI74316994 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00688853 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACG CATCCGTCGC ACTGGCCCTT GTGGCCGCAT TCGCAAGCGC CGCGCAGGCC 
GCACCCGCAA TGATGTCCGC GGAGTGGACC GCACAGGCTT GCGACGCCTG GAACAAGGAC
GCGGCACTCA CCAACGGTCT GGCCGAAAAA TGGGTCAAGA ACGACAAGGG CCGCGGCTAC
AAGATCATCC ACCTCTACCG CACCGACTGC GGCGAGCCGA CGCAGACCGA AATGAAGATC
TCGGCCAAGG ACGGCAAGGC GATGTGCGTC TACGGCGGCG CCGTGCAGAA CCCGAAAATG
GATCACGCCG TCGACTACAC GATGCATGCG ACGACCGACC GCTGGGACGA AATGGGCGCT
GGCGAATACG GCCCCATGAA GGCCATGATG TTCGGCCGCC TGAAGTTCGC CGGACCGAAG
ATGGAGGCGA TGAGCGTGAT GGGCCCGTTC GAAGCCTTCC TGCGTCTGCC CGGGAAAATC
CCCGGCGACA AAGCCTGCCC GGCCAAGTAA
 
Protein sequence
MKYASVALAL VAAFASAAQA APAMMSAEWT AQACDAWNKD AALTNGLAEK WVKNDKGRGY 
KIIHLYRTDC GEPTQTEMKI SAKDGKAMCV YGGAVQNPKM DHAVDYTMHA TTDRWDEMGA
GEYGPMKAMM FGRLKFAGPK MEAMSVMGPF EAFLRLPGKI PGDKACPAK