| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0973 |
|---|
| Symbol | |
|---|
| ID | 3671196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1037077 |
|---|
| End bp | 1038534 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637709654 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_314731 |
|---|
| Protein GI | 74316991 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5316] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.442051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGTA ACACGAGGCT GCTCGGCACG GCGATCGCCG GCCTGGCCGT GGCGGGCCTG
TCCGCAGGCG CGTCCGCCAC GAACGATATC GTCAGCCGGG TCGCCGACCG CGAGAGCGTC
GCACTCACGC TCTACGCCGA CGATCTCGCC CTGATCAAGG ACGTCCGCCG CGTCCGCCTG
GGTCCCGACA TGAACCGCCT GAGTTGGCTC GACGTCGCCG CGCAGCTTCG CCCGGAGACG
GTGCGCTTGC GCAATCTGTC CGATCCCGCC GGCTTTCGGG TCAGCGAGCA GGCCTTCGAT
TTCGACCTGC TGACGCCAGA AAGACTGATC GAGCACTACG TCGGGCGCGA AGTCGGTGTC
ATCCGAACAC ATCCGGGCAC GGGCGCCGAA AGCCGCGAGA AGGCGACGCT GCTGACGAGC
CGCGGCGGCG TCGTGCTGCA GTTCCCCGAC CGCGTCGAAA CAGGAATGCC GGCCCGGCTC
GCATTTCCCG CCGTGCCCGA CGCGCTCCAC ACGGCGCCCG CACTCGTCTT TTCGCTCGCC
GACGCGCGGG CGGGCGCGCA GCGGCTCGAG CTTTCGTATC TGACGACGGG CCTCTCGTGG
CGCGCGGATT ACGTCGTGGA ACTCCGCGAC GATGGGGCGC ATCTGGATCT CGACGGTTGG
GTGACGCTGG TCAACCAGAG TGGCGCCGCC TATCGCGACG CCCGGCTGCA GTTCGTCGCC
GGCACGCTCA ACCGCGTCCG CGACGGGGCG CAGCCGCTGG CGCGCGAGTC GATGTCGCTC
GGCGCGAAGT CCGCGGGTGG CGCGTATCTG CAGCCCGAGC CGCTGGCCGG CCATCATCTC
TATACGCTGC CGCAGCCGAC GAGCCTCGCG GAAAACCAGA CCAAGCAGGT CGCACTCCTG
CGCGCGGCGC GCGTGCCGGT CAGGAAGGAA CTCGTGCTGC AGGGCGTCGG CCACATCTAT
ACGGGCCGCT ATCCGGCCCC GTCGCAGCCG GCGCACGTCG GCATGTTCCT CGAATTTGAA
AACCGGGGCG CCGGCCTCGG GCTGCCCTTG CCTGCGGGCG TCGTGCGCGT CTACGAGCAG
GATGCCCGTG GCAGCAGCCA GTTCGTCGGC GAGGACCGGA TCGGCCACAC GCCGAGGAAC
GAATCGCTCC GGCTGACGCT CGGCGAAGCC TTCGACCACA CCGCCGAACG CAGGCAGACG
GCTTTCGAGC AACGGCCCGG CACGCAGCGT GACGCCGCCG TCTACGAGTC GGCGCATGAA
ATCGTGTTGA AGAACGCAGG GAAGGAAACG GCGACCGTCA CGGTCCGCGA GCCGATCCCC
GGCGACTGGG AGATACTTTC CGAGTCGCGG CCGCACGCGC GACCCGACGC CGGCACCGCC
GAGTGGAAGC TGCGCGTGCC GGGCGGCGGC AAAGCGACGC TCGTTTATCG CGTGCGCGTC
AAGGGCCTGA TGCAGTAG
|
|---|
| Protein sequence | MFRNTRLLGT AIAGLAVAGL SAGASATNDI VSRVADRESV ALTLYADDLA LIKDVRRVRL
GPDMNRLSWL DVAAQLRPET VRLRNLSDPA GFRVSEQAFD FDLLTPERLI EHYVGREVGV
IRTHPGTGAE SREKATLLTS RGGVVLQFPD RVETGMPARL AFPAVPDALH TAPALVFSLA
DARAGAQRLE LSYLTTGLSW RADYVVELRD DGAHLDLDGW VTLVNQSGAA YRDARLQFVA
GTLNRVRDGA QPLARESMSL GAKSAGGAYL QPEPLAGHHL YTLPQPTSLA ENQTKQVALL
RAARVPVRKE LVLQGVGHIY TGRYPAPSQP AHVGMFLEFE NRGAGLGLPL PAGVVRVYEQ
DARGSSQFVG EDRIGHTPRN ESLRLTLGEA FDHTAERRQT AFEQRPGTQR DAAVYESAHE
IVLKNAGKET ATVTVREPIP GDWEILSESR PHARPDAGTA EWKLRVPGGG KATLVYRVRV
KGLMQ
|
|---|
| |