| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0960 |
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| Symbol | |
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| ID | 3672752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1022197 |
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| End bp | 1022934 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709639 |
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| Product | orotidine-5'-phosphate decarboxylase |
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| Protein accession | YP_314718 |
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| Protein GI | 74316978 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.452775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACA AGATTATCGT CGCGCTGGAT TTTCCGGCGG GTGCCCCGGC GCTGGCACTG
GCGGATCGGC TCGATCCCGC ACGATGCCGG CTCAAGGTCG GCAAGGAGTT GTTCACGGCA
GCCGGACCCG ATCTCGTGCG CGCGCTGGTC GCGCGCGGCT TCGAGGTCTT TCTCGATCTC
AAGTTTCACG ATATCCCGAA TACCGTCGCC GCCGCGTGCC GCGCGGCCGC GGGACTCGGC
GTGTGGATGC TCAACGTCCA CGCCGCGGGC GGTCGGCGCA TGATGGACGC CGCCCGCGAG
GCGCTCGAAT CCCTGCCCCC GGGGGATGGC GCCGCGGATA CGCCGCAACG CCCTTTGCTG
ATCGCGGTCA CTGTGTTGAC GAGCATGAGC GCCGGCGACC TCGCCGAGAC CGGCGTCGCC
GACACGCCGG CCGAGCAGGT GATGCGGCTC GCCCGCCTCG CACACGCCTG CGCGCTCGAC
GGCGTCGTCT GCTCCGCGCA GGAGGCCGCA GGTCTGCGTG CCGCGCTCGG CGCGGACTTC
CGTCTGGTCA CCCCGGGGAT TCGCCCGGCG GGCGCCGCAG CGGCGGACCA GCGCCGCGTG
ATGACGCCGG TCGAGGCGCT GCGCGCCGGA GCCACCGATC TGGTGATCGG CCGCCCCATC
ACCGGCGCGG GCGATCCGCT CGCGGCGCTC GCGGCGATTC AAGCGGACAT TGAAGAAAAT
CTAGGGAGAG CGTTTTGA
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| Protein sequence | MTHKIIVALD FPAGAPALAL ADRLDPARCR LKVGKELFTA AGPDLVRALV ARGFEVFLDL
KFHDIPNTVA AACRAAAGLG VWMLNVHAAG GRRMMDAARE ALESLPPGDG AADTPQRPLL
IAVTVLTSMS AGDLAETGVA DTPAEQVMRL ARLAHACALD GVVCSAQEAA GLRAALGADF
RLVTPGIRPA GAAAADQRRV MTPVEALRAG ATDLVIGRPI TGAGDPLAAL AAIQADIEEN
LGRAF
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