| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0899 |
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| Symbol | pepN |
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| ID | 3672690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 948937 |
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| End bp | 951714 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709578 |
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| Product | aminopeptidase N |
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| Protein accession | YP_314657 |
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| Protein GI | 74316917 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.570947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.595006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCG AAACCCCCGT CACGCTTTAC CTGAAGGATT ACGCCCCGCC CGCCTGGCGG
ATCGAGTCGG CCGACCTGCA CGTCGCCATC CACGACGACC ATGCCGAGGT GCGTGCGCGC
CTCGACTGCG TGCGCAACAC CGCGGGCGGC GACGACGCGC TGGTTCTGAA CGGCGAAGCG
CTGGAACTCG TCGGCCTCAG CCTCGACGGC GCGCCGCTCG ACCCCGCGCG CTACGTGTAC
GGCGACGATC TGCTGCGCAT CGCGGGGCCC CTGCCCGATC GCTGCGTGCT CGAAAGCGTC
GTGCGCATCC GCCCCGATCT GAACACCCAG CTCTCGGGCC TCTACCGCTC GCAGGACGGC
TATTTCACGC AATGCGAGCC CGAAGGCTTC CGCCGCATCA CCTTCTTCCC GGACCGGCCC
GACGTGATGA CGAAATTCAG CTGCACGGTC GAAGCCGACC GCGCGCGGTT TCCGCATCTG
CTGTCGAACG GCAATCCCGT GGCGGCGGGG GTCTGCGACG ACGACGCAGC GCGGCACTGG
GCGCGCTGGG ACGACCCCTA CGCCAAGCCG TGCTACCTGT TCGCGCTCGT CGCCGCCAGG
CTCGACGTGC TGGAGGACGA ATACGTCACC GCCTCGGGAC GCAAGGTCAG GCTCGCGGTC
TACGTCGAGC CGGGCAAGCT CGACCAGTGC GGCCACGCGA TGGCCGCGCT GAAAAAAGCC
ATGCGCTGGG ACGAAGAGCG CTTCGGCCTC GAATACGACC TCGACCAGTA CATGATCGTC
GCCGTCGGCG ACTTCAACAT GGGGGCGATG GAGAACAAGG GCCTCAACAT CTTCAATACC
AAATACGTGC TCGCCCGCCC CGACACCGCG ACCGACGCCG ACTACCAGGG CATCGACCGC
GTGGTGGCGC ACGAGTATTT CCACAACTGG ACCGGCAACC GCGTCACCTG CCGCGACTGG
TTCCAGCTGT CGTTGAAGGA AGGCCTCACG GTGTTCCGCG ACCAGGAATT CGGCGCCGAC
ACGCACTCGC GCGCGGTCAC CCGCATCCAG GAAGTGCGCG CACTGCGCGT CGGCCAGTTC
CCCGAAGACG TCGGGCCGAT GGCGCACCCG ATCCGGCCGG CCTCCTACGC CGAGATCAAC
AACTTCTACA CCGCCACCGT CTACAACAAG GGCGCGGAAG TCATCCGCAT GATGCACACC
CTGCTCGGGC GCGAGGCGTT CCGCCGCGGC ACGGATTTGT ACTTCGCGCG CCACGACGGC
CAGGCCGTCA CCTGCGAGGA TTTCGTCGCA GCGATGCAGG ATGCTTCCGG GATCGACCTC
GCGCAGTTCC GCCGCTGGTA CGCGCGCGCC GGCACGCCGC GCCTGAACGC ATCAAGCAGC
TACGACGCCA CGACCCGACG CTACACGCTG ACGCTCACGC AAACCCTCGC GCCGACCGCC
TACGAAAAGC GGCTGACCGA ATCGGGACAG GCCATCGTCG ACGGCACGCT GCACATCCCC
GTCGCGCTCG GGCTGGTATT GCCAAATGGT AATGACGCGC CGCTGAAACT CGCCGGTGAG
GCCGAGGCGA GCGGCACCAC GCGCGTCCTC TCGCTGACCG AGCCCACGCA GACCTTCGTC
TTCGAGGACA TTCCCGCCGC CCCCGTCGCC TCGCTGCTGC GCGATTTTTC GGCGCCGGTG
CAGTTGGAGT TCGAACAGAC CGACGCCGAG CTCGCGCACC TGATGGCACA CGATGACGAC
GCCTTCAACC GCTGGGAAGC CGGGCAGCGG CTGGCGACGC GGGTGCTGCT CGCCGGTATT
GCCGCGCAGC AACGCGCAGC GTTGATGCGC CATACTCTCC CGCATGCGGG AGAGGACGAC
TCGTGGCGTG GCGCCGGCAG CGACTGGATT CCCGACGCCT TCGTCGCCGC CTGCGGCCGC
GTGCTCGACG CCGGCCTCGC CGGCGACCCG GCGCTGGCTG CCGAAGCGCT CAACCTGCCC
GCCGAAGCCG TGCTCGCCGA AGCGGTGGTA TCGCTTGGCC AGCCCATCGA CCCCGAAGCC
ATCCACGCCG CGCGCGTGGC CCTGCGCCGC CACCTCGCCG CCCGTCTGCG CGACGCCTTC
GAAGCCGCTT GGGCCGCCCT CACCCCAACT GCGGCCTATG CGCCCGACGG CGCCCAGGTC
GGCCAGCGCG CCCTGCGCAA CGCCTGCCTC GGCTACCTCG CCGAAAGCGA CGTCGAGTAT
TTGCAGAGCG CGGTCGTCCC GCGCCTCACC GCCCAGCTCG CGGCGGGCGG CAACATGACC
GACGGCAACA TGACCAGTCA AATGGCCGCG CTGGCCACGC TCGCCAACCT CGACCTGCCG
GAAAGGGAAG CGACGCTCGC CGATTTCTAC ACGCGCTGGC AAAACGAAGC CCTGGTCGTC
GACAAGTGGT TTGCCGTGCA AGCCACCTCG CGCCTGCCAG GCACCGCCGC GCGCGTGCGC
GCGCTGATGC AGCATCCGGC GTTTGACCTC AAGAACCCCA ACCGCGTCTA TGCCCTGATC
CGCGGCTTCT GCGGCGCCAA CCCGCGCCAC TTCCACGCCT TTGATGGCAG CGGCTACGCG
CTGGCGGCCG ACGTCATCAG CGAATTGCAG GCCATCAACC CCCAGGTCGC GTCACGCATC
GCGCGCAGCT TCGATCGCTG GCGGCAGTTC GACGCCGGTC GGCAGGCACA CGCGCGCGTG
GCGCTGGAAC GTATCGCGGA GATCGAGGAT CTAGCGAAGG ACGTGGCGGA AGTTGTGGGG
AATGCGCTAA AGGGTTGA
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| Protein sequence | MRTETPVTLY LKDYAPPAWR IESADLHVAI HDDHAEVRAR LDCVRNTAGG DDALVLNGEA
LELVGLSLDG APLDPARYVY GDDLLRIAGP LPDRCVLESV VRIRPDLNTQ LSGLYRSQDG
YFTQCEPEGF RRITFFPDRP DVMTKFSCTV EADRARFPHL LSNGNPVAAG VCDDDAARHW
ARWDDPYAKP CYLFALVAAR LDVLEDEYVT ASGRKVRLAV YVEPGKLDQC GHAMAALKKA
MRWDEERFGL EYDLDQYMIV AVGDFNMGAM ENKGLNIFNT KYVLARPDTA TDADYQGIDR
VVAHEYFHNW TGNRVTCRDW FQLSLKEGLT VFRDQEFGAD THSRAVTRIQ EVRALRVGQF
PEDVGPMAHP IRPASYAEIN NFYTATVYNK GAEVIRMMHT LLGREAFRRG TDLYFARHDG
QAVTCEDFVA AMQDASGIDL AQFRRWYARA GTPRLNASSS YDATTRRYTL TLTQTLAPTA
YEKRLTESGQ AIVDGTLHIP VALGLVLPNG NDAPLKLAGE AEASGTTRVL SLTEPTQTFV
FEDIPAAPVA SLLRDFSAPV QLEFEQTDAE LAHLMAHDDD AFNRWEAGQR LATRVLLAGI
AAQQRAALMR HTLPHAGEDD SWRGAGSDWI PDAFVAACGR VLDAGLAGDP ALAAEALNLP
AEAVLAEAVV SLGQPIDPEA IHAARVALRR HLAARLRDAF EAAWAALTPT AAYAPDGAQV
GQRALRNACL GYLAESDVEY LQSAVVPRLT AQLAAGGNMT DGNMTSQMAA LATLANLDLP
EREATLADFY TRWQNEALVV DKWFAVQATS RLPGTAARVR ALMQHPAFDL KNPNRVYALI
RGFCGANPRH FHAFDGSGYA LAADVISELQ AINPQVASRI ARSFDRWRQF DAGRQAHARV
ALERIAEIED LAKDVAEVVG NALKG
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