Gene Tbd_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0811 
Symbol 
ID3673508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp852686 
End bp853357 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID637709489 
Producthypothetical protein 
Protein accessionYP_314569 
Protein GI74316829 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.101718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC GCGCAGGCGG CGTGAGCGCG CCCCCGTGGG ACAGCCTCAA TCTCGGCGAC 
CACGTCGGCG ACGATCCCGC CGCCGTCGCC GCCAATCGCG CGCGCCTGCG CGAGCGGCTG 
CCGGACGAGC CCGGCTGGCT CAGGCAGGTG CACAGCGCAC GCGTGGTCGA ACTCGGCCGC 
GACAGCGCAC GCGAAGCCGA CGCCGCGGTG ACGCGCGCGC CGGGGCAGGT CTGCGCCGTG 
CTCACGGCCG ACTGCCTGCC AGTGCTGTTC TGCGACCGCG CCGGCAGCGT CGTCGCCGCG 
GCGCATGCGG GCTGGCGCGG GCTGGCCGAG GGCGTGCTCG AAGCCACGGT CGCCGCCATG 
CAGGTGCCGC CGGCCGAAAT CGTCGCCTGG ATGGGTGCCG CGATCGGCCC CGAGGCCTTC 
GAGGTCGGCG ACGAGGTGCG GCAGGCCTTC GTCGACCGCC ACCCAGAAGC CGCTGCCGCC 
TTCGTACCGC AATCCGCAGC GGGCAAATGG CGCGCCGACA TCTACGAATT GGCGCGCACC 
CGCCTCGGGC ATGCAGGCGT GCGGGCCGTC CATGGCGGCG GACGCTGTAC CTTCGGCGAA 
GCCGAGACGT TCTATTCCTA CCGGCGCGAG GGCGTGACCG GACGGATGGC GGCATTGGTC 
TGGCTCGACT AA
 
Protein sequence
MTTRAGGVSA PPWDSLNLGD HVGDDPAAVA ANRARLRERL PDEPGWLRQV HSARVVELGR 
DSAREADAAV TRAPGQVCAV LTADCLPVLF CDRAGSVVAA AHAGWRGLAE GVLEATVAAM 
QVPPAEIVAW MGAAIGPEAF EVGDEVRQAF VDRHPEAAAA FVPQSAAGKW RADIYELART 
RLGHAGVRAV HGGGRCTFGE AETFYSYRRE GVTGRMAALV WLD