| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0805 |
|---|
| Symbol | sucC |
|---|
| ID | 3673502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 846766 |
|---|
| End bp | 847926 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637709483 |
|---|
| Product | succinyl-CoA synthetase subunit beta |
|---|
| Protein accession | YP_314563 |
|---|
| Protein GI | 74316823 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.623629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC ACGAATACCA GGCCAAACAA GTCTTGCGGT CGAGCAACCT TAACACGCCG
CGCGGCATCG CTGCGACGAG CGCCGACGCC GCGGCCGACG CCGCCCGCGA ACTGGGCGGC
GAGGCCTGGG TCGTGAAGGC CCAGATCCAC GCCGGCGGGC GCGGCAAGGC CGGCGGCGTC
AAGGTCGTGA CGAGCATCGA CGCGGTGCGC AGCGTCGCCG CCGCGTTGCT CGGCAAGCCG
CTCGTCACCG TGCAGAACGC GCCCGACGGC CAGCCGGTCC ATACCGTGCT GGTCGAGGAA
ACGCTGCCGA TCGCACGCGA ACTGTATCTT TCGCTGCTGG TCGACCGTGC CTCCGAGCGC
GTCGCGGTCG TCGCGTCGGC CGCGGGCGGC ATGGACATCG AGCAGGTCGC CCATGCCACA
CCCGAGAAAG TTCTGACCGA GATCTGCGAT CCGCTGCTCG GCGTGCAGGA TTTCCAGTGC
CGCGCGCTCG CTTTCGCGCT CGGGCTCGGC GGCGACGCCT ACAAGGATTT CTGCCGCCTG
CTGCCGCAGC TCTACCGTGT CTTCGTCGCC AATGATCTGA GCCTGCTCGA GATCAATCCG
CTCGTCGTCA CCACCGACAA CCGCGTTCTG CCGCTCGACT GCAAGATGAG CGTCGACGAC
AACGCGCTCT ACCGCAGGAA GGCGCTCGCC GACCTGCGCG ACGACAGCCA GATCGACGCC
AAGGAAGCGG CCGCCAACGC GGCCAACGTC AACTACGTCG CGCTCGCCGG CAACATCGGC
TGCATGGTCA ACGGTGCCGG TCTCGCGATG GCGACGATGG ACCTGATCCA GCTCGAAGGC
GGCGCGCCGG CCAACTTTCT CGACGTCGGC GGCGGAGCGA CGCCCGAGAC CGTCGCGCAG
GGCTTCAAGA TCATCCTGCT CGACCCCAAC GTGAAGGCCG TGCTGATCAA CATCTTCGGC
GGCATCGTGC GCTGCGACGT GATCGCCGAG GGCATCATCC AGGCGGTCAG GGAAGTCGGC
GTCGAGGTTC CGGTCATCGT GCGCCTCGAG GGCACGAATG CCGAACTCGG CCGCACCCTG
CTGGCCGAAT CGGGCCTCGC GATCGTCGCG GCCGAGAGCC TGACCCAGGC CGCGAAATTC
GCCGTGGAGA AAGCGGCATG A
|
|---|
| Protein sequence | MNLHEYQAKQ VLRSSNLNTP RGIAATSADA AADAARELGG EAWVVKAQIH AGGRGKAGGV
KVVTSIDAVR SVAAALLGKP LVTVQNAPDG QPVHTVLVEE TLPIARELYL SLLVDRASER
VAVVASAAGG MDIEQVAHAT PEKVLTEICD PLLGVQDFQC RALAFALGLG GDAYKDFCRL
LPQLYRVFVA NDLSLLEINP LVVTTDNRVL PLDCKMSVDD NALYRRKALA DLRDDSQIDA
KEAAANAANV NYVALAGNIG CMVNGAGLAM ATMDLIQLEG GAPANFLDVG GGATPETVAQ
GFKIILLDPN VKAVLINIFG GIVRCDVIAE GIIQAVREVG VEVPVIVRLE GTNAELGRTL
LAESGLAIVA AESLTQAAKF AVEKAA
|
|---|
| |