Gene Tbd_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0804 
Symbol 
ID3673501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp845549 
End bp846757 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID637709482 
Producthypothetical protein 
Protein accessionYP_314562 
Protein GI74316822 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTC CCCAAAACGC GCATTCTGAA GCAAAGGTCC CCGCGACGGA AGCCGTGATC 
CGCGTCGTGA CGCGCATCGC GGCGCTGTCG GCCGAGGCGT GGAACACGCT CGCCGGCGAC
TCGCCTTTCG TGCAGCACGC CTTCCTCGAC GCACTGGAAA CCAGCGGCTG CGTCGACGCA
TCGCTCGGCT GGGAACCCGT TCACCTCGCG CTCTTTCGCG ATGGCCGGCT CGACGCCGCA
ATGCCGCTCT ACGTCAAGCA TCACTCCTGG GGCGAGTTCG TCTTCGACTG GGCCTGGGCC
GACGCCTATC GTCGCGAGGG CCTCGCCTAC TATCCCAAGC TCGTCTGCTG CGTGCCCTTC
TCCCCCGTCG CCGGCCCGCG CCTGCTGGCG CGCAGCGACG AGGATCGCGC CGCCCTGCTC
ACCGCGGCGC AGACGCTCAC GCGCGACCTC GGCGCCTCGT CCTTCCATGT GCTGTTCCCG
TCCGAGGCCG ACCACGCGGC GCTCGCGGCG TCGCCGCTGC TGCATCGCAC CGGCTTCCAG
TTCCACTGGC ATGCGTCCGC CGAGGGCGAC GAGGCTCGCT ACGCCAGCTT CGACGACTTC
CTCGCCGCAC TCACCCACGA CAAGCGCAAG AAGATCCGCC AGGAAAGGAA GAAGCTCGCG
AATCTCGGCA TACGCTTCCG CTGGGTCGAA GGGCGGCAAA GCAGCGACGC CGACTGGGAC
TTCTTCTACC GCTGCTACGC CGACACCTAT GCCCGTCATC GCAGCGAGCC GCACCTCAAC
CGAGCGTTCT TCGCGACGCT GCGCGAGAAG GCACCGGAGT CGCTGCTCCT CATCATCGCC
GAGCGCGACA ACGTGCCGGT CGCCTGCTCG TTCTGCATGA AGGACGGCCG GCGGCTGTAC
GGCCGCCATT GGGGCGCGCT GGAATACGTG CCCGGCCTGC ATTTCGAGAC CTGCTACCAA
CAGGGCATCG AATACGCGAT CGCCCAGGGT CTGCAGGTAT TCGAAGGTGG TGCCCAGGGC
GAACACAAGC TCGCACGCGG CCTCACGCCG ACGCCGACCC ATTCCTGGCA CTGGCTCGAG
AACGCCGAAT TCCGCAAGGC CGTCGACCGC TTCCTCGAGC GCGAGACCGA CGCCATCGGG
CACTACATCG ACGAGTTGGA CGGACCCTTC CGCCACCCGC CGCCACCGTC TACAGTGGGG
AAGACCTAG
 
Protein sequence
METPQNAHSE AKVPATEAVI RVVTRIAALS AEAWNTLAGD SPFVQHAFLD ALETSGCVDA 
SLGWEPVHLA LFRDGRLDAA MPLYVKHHSW GEFVFDWAWA DAYRREGLAY YPKLVCCVPF
SPVAGPRLLA RSDEDRAALL TAAQTLTRDL GASSFHVLFP SEADHAALAA SPLLHRTGFQ
FHWHASAEGD EARYASFDDF LAALTHDKRK KIRQERKKLA NLGIRFRWVE GRQSSDADWD
FFYRCYADTY ARHRSEPHLN RAFFATLREK APESLLLIIA ERDNVPVACS FCMKDGRRLY
GRHWGALEYV PGLHFETCYQ QGIEYAIAQG LQVFEGGAQG EHKLARGLTP TPTHSWHWLE
NAEFRKAVDR FLERETDAIG HYIDELDGPF RHPPPPSTVG KT