| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0652 |
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| Symbol | |
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| ID | 3672617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 691241 |
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| End bp | 694237 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709324 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_314410 |
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| Protein GI | 74316670 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.667506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACT ACGCCATCAC CATGCCGCAG CTCTCGGACA CCATGACCGA GGGCGTCGTC
GTCACCTGGG AAAAGCAGCC GGGGGACCGC GTCGAGCGCG GCGACATCGT CGCGACGGTC
GAGACCGACA AGGCGATCAT GGACGTCGAG GTGTTCAAGG CCGGCTATCT GGCCGGCCCG
CTCGCCGACG TCGGCGCGAC GATCGCGGTC GGGGCGGCGC TCGGCTACAT CACCGACACG
GCCGGGGACG TCGCGATCGC GGCCGACGAA GTCGTGGCGG AGCAGGCGCA GACGGAAATG
ATCCCGCACC ATGCGGGCAC GCCGATCGTC ATGCCGCAGC TTTCCGACAC GATGACCGAA
GGCGTCGTCG TGACCTGGGA AAAGCAGCCC GGCGAAGCCA TCAAGCGCGG CGACATCGTC
GCCACGGTCG AGACCGACAA GGCGATCATG GACGTCGAGG TGTTCCAGGA GGGCTTCCTG
TCGGGGCCGA TCGCCGACAT CGGCAGCGTC GTCGAGGTCG GCCACCCGAT GGCCTTCATC
GTCGACGACG CCGCCAAGGC GAACGACACG GGCGTGACCA TTTCCGCCGA CCACAAGGTC
AAGGACACGC ACAAGGTCGC CCCGCCCGCG GCTGACAAGC CGGCGCATTT GCCGATTCCG
AAGACTGCGC CTTCACAGGT CGCCGCAGCC GGTAACGCGG TGCCCGTACC GCGCCCGCAG
GGCCGCCAGG CAAGCCCGTA CGCACGCAAG GTCGCCGCCC AGCTCGGGGT GAACCTCACG
GGTCTTGCCG GCTCGGGACC CTCGGGGGTC CTCGTCGCCG CCGACGTCGC GCGTGCGCGG
CCGTCGATGC AGGAAGTCGC CCACGCGCTG CCGCAGGTCG ACGTGCCGGG CCAGGGTCGC
CCGATGACGT CGATGGAAAA GGCTGTCAGC CACGCGATGA CCGCCTCGCT GACGCTGCCG
ACGTTCAATG TCACGGTGAA CATCGACACC GCCGCGCTGA CCGCCGCCAC CAAGGCGAAG
AAGGTCTCGG TGACGGTGGC GATCGCGAAG GCCTGCTCGG TCGCGATGGC GAAGTTCCCG
CGCATGAACT GGGCCTACCA GCCGGTCGAC AAACTCGTCG AGCGTGCGAA TCACGACTTC
GGCGTCGCTG TGATGTCGAA CGACGGCGGC CTCGTCGTGC CGATCCTGCA CGGCGTCGAG
AAAAAGTCGC TCGAGGCCCT CCAGGGGGAC TGGACCGGAC TCGTCGAGCG CGCGCGGGTC
AGGAAGCTCG CCCCGCCCGA GTATTCCAAT CCGACCTTCA CGATCTCCAA TATGGGCATG
CTCGGCGTGT CCCACTTCAC CGCAATTCCG ACGCCGGGCA TTTCGGCGAT CCTCGCGATC
GCGGCCAACG GCCCGCAGGG CACGCCGTTC ACGATCACGG GCGACCACCG CGTGCTGAAC
GGCGCGGACG TCGCGCTCTA TCTCACGACG CTCAAGCAGA CGATCGAAGC GCCGGACGCC
TGGCTTTCCG GCGGCACGGC CGCGGAAACG GCCGGCGCTG CCGCCACCAC GAGCGCACCG
GTCTCACCCA TCCCCGAAGG CAACTGGGAC GTCCAGGTCG TCGTCGTCGG CGGCGGCCCC
GGCGGCGAAG ACTGCGCGCG CGACCTCGCC GACCACGGCG TCAAGGTGAT GATGGTCAAC
AACGAGCCCT TCCCCGGCGG CGAATGCCTG TGGCGCGGCT GCATCCCGTC GAAGGCGTGG
CGCGCCGCGG CGGACAACAT CCGCAACCGC GCGCACGACG CCGAGATGGG CGTCGACGGC
ACGGCGAACC CCAAGCTCAA CTGGGCGCAG GTCGAGAAGC ACCGCCGCTG GGTGCAGACC
AGCCGCGGCG AAATGGCGCT CAAGGCCGAC AAGGGCATGA AGATCGACGT GCGCGAAGGC
TACGGCGAAT TCGTCGACGC CCACACGCTG AAAATCACTC CGCCCGAAGG CGAGGCGTAC
ACGGTCAGCT TCGGCGCCGC AGTCATCGCG ACCGGCGCGC CGGCTTTCGT TCCGCCGATC
CCCGGCGCGC GCGAGAACCT GGCGACCGGC GGCGTCGTCA CCTCCGACAC GATCTGGAAC
CTCGCCAACC CGCCGAAGAA GCTCGGCATC GTCGGCGGCG GCGTGATCGG CGTCGAGATG
GCGCAGATCT TCCGTGACTT CGGCACCGAG GTGCTGATGC TCGAGCGCCA CGACCGCATC
CTCGCCGAAA TCGAGGAGGA GATCGGCAAG GTCCTGATCG CCTCGCTGGA GAAGGAAATC
ACGGTCGTGA CCAGCGCCGA CATCAGGGAA GTCGGCGGCA AGCCCGGCAA GATGACGTTG
CGCTACGCCG ACAAGGAAGG CGCCGAATCG ACCTTCGACT GCGACGTCGT GTTGATGGCG
ACCGGCAAGC GTCCCGACAC CAGCCGGCTC AACCTCGACA AGGTCGGCGT CGCGCTCGAC
GGCGCGGCGA TCAAGGTCGA CGCCCGCTGC TGCACGAGCA CGCCGAACAT CTACGCCGTC
GGCGACGTCA TCGGCGGCTA CATGCTCGCA CACACCGCCG CGACGCAGGG CCGCGTCGCC
GCATCGAACC TGCTCGGCCA CGCCAGCGAG TACGACCAGG ACCGTGATTG CGGCGTGACC
TTCTCGCGCC CGCAGGCCGG CTTCGTGGGC CTCTCGGTCG CACAGGCCAA GGCCAAGGGC
ATCGACGCGG TCGAAGCGAA GATGCCGATG AGTATCGACG CCAAGGCGAT GATCACCGGC
GAGACCGAGG GCATGATCAA GCTCGTCGCC GACAAGACGA CCGGCCGCAT CATCGGCGTG
CATTATCTGG CCGACCACAC CGACACGCTG ATCGGCACCG GCGTGATGAT GGTCGCAGGC
GAGATGACGC TGACTCAGGT CGCGAAGGCG ATCTTCCCGC ACCCGACGCA GACCGAACTC
TTCGGCGAAC TCGCGCGGCG TTTGCTGAAT CGCCTCCGCC GCACCGCGAA GAAATAA
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| Protein sequence | MNHYAITMPQ LSDTMTEGVV VTWEKQPGDR VERGDIVATV ETDKAIMDVE VFKAGYLAGP
LADVGATIAV GAALGYITDT AGDVAIAADE VVAEQAQTEM IPHHAGTPIV MPQLSDTMTE
GVVVTWEKQP GEAIKRGDIV ATVETDKAIM DVEVFQEGFL SGPIADIGSV VEVGHPMAFI
VDDAAKANDT GVTISADHKV KDTHKVAPPA ADKPAHLPIP KTAPSQVAAA GNAVPVPRPQ
GRQASPYARK VAAQLGVNLT GLAGSGPSGV LVAADVARAR PSMQEVAHAL PQVDVPGQGR
PMTSMEKAVS HAMTASLTLP TFNVTVNIDT AALTAATKAK KVSVTVAIAK ACSVAMAKFP
RMNWAYQPVD KLVERANHDF GVAVMSNDGG LVVPILHGVE KKSLEALQGD WTGLVERARV
RKLAPPEYSN PTFTISNMGM LGVSHFTAIP TPGISAILAI AANGPQGTPF TITGDHRVLN
GADVALYLTT LKQTIEAPDA WLSGGTAAET AGAAATTSAP VSPIPEGNWD VQVVVVGGGP
GGEDCARDLA DHGVKVMMVN NEPFPGGECL WRGCIPSKAW RAAADNIRNR AHDAEMGVDG
TANPKLNWAQ VEKHRRWVQT SRGEMALKAD KGMKIDVREG YGEFVDAHTL KITPPEGEAY
TVSFGAAVIA TGAPAFVPPI PGARENLATG GVVTSDTIWN LANPPKKLGI VGGGVIGVEM
AQIFRDFGTE VLMLERHDRI LAEIEEEIGK VLIASLEKEI TVVTSADIRE VGGKPGKMTL
RYADKEGAES TFDCDVVLMA TGKRPDTSRL NLDKVGVALD GAAIKVDARC CTSTPNIYAV
GDVIGGYMLA HTAATQGRVA ASNLLGHASE YDQDRDCGVT FSRPQAGFVG LSVAQAKAKG
IDAVEAKMPM SIDAKAMITG ETEGMIKLVA DKTTGRIIGV HYLADHTDTL IGTGVMMVAG
EMTLTQVAKA IFPHPTQTEL FGELARRLLN RLRRTAKK
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