| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0613 |
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| Symbol | |
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| ID | 3673724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 642695 |
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| End bp | 643363 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709285 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_314371 |
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| Protein GI | 74316631 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0797434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGC GATTGTTCGT GTTGCTGGCT CTGTGCGCGT TGCTCCCGGC CGCCCCGGCC
GTGGCCGAGG TTCGCACCTT CGCGCTCGAC GGCGACGAGG CCGCCCTGGC GGCCCGGCCG
CAGGCGGAGT GGGTCCGGCA CGCGCGGGTC TTCGAAAAAC GCCGCGACTG GGCGGGCCTG
TTGGCGTGGG GCGAGAATTG GGCGCGCGGC GACCCCGACA ACCCGCTCGC GTGGTTCATA
CAGGGGCGAG CGCTCGCCGA ACAGGGTCGC TACCCGGAGG CGATCGAGGC GTATCGGCAA
AACCTGCGTC TCGCGCCGGG TGACGTCTTT GCCCTCAACA ACCTCGGCAA CGCCTACCGC
GACAGCGGCG ATTCGCGCGC GGCGATGCTC GCCTATCGCG CCGCGGCCGA GCGTGCGCCC
GACTACGTCG CCGCGTGGCA CAACCTCGGG CTCACCTTCT ATCTTGCGAA GGGAGACGCG
GGCGTCGCCC GCGCTCTCGA CCGGCTGCAC GCGACCGACC CGCAGCTCGC GGCCGTGTGG
CACGCGCTCG CGCTCGAATA CGCGATCACG CGCGACGAAC GCGTCGCTCG CGACGCGCTG
CGCGTGCTGC GCTCATTGAG CCGCGCCGAA CGCAAGCGCA TGTTCGATAT CCTGCTCGAA
ACCGGCTAG
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| Protein sequence | MSKRLFVLLA LCALLPAAPA VAEVRTFALD GDEAALAARP QAEWVRHARV FEKRRDWAGL
LAWGENWARG DPDNPLAWFI QGRALAEQGR YPEAIEAYRQ NLRLAPGDVF ALNNLGNAYR
DSGDSRAAML AYRAAAERAP DYVAAWHNLG LTFYLAKGDA GVARALDRLH ATDPQLAAVW
HALALEYAIT RDERVARDAL RVLRSLSRAE RKRMFDILLE TG
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