| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0592 |
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| Symbol | |
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| ID | 3673702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 620811 |
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| End bp | 621596 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709263 |
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| Product | TPR repeat-containing pilus assembly protein PilF |
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| Protein accession | YP_314350 |
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| Protein GI | 74316610 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.83159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.24417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGAAAC CGGAGCTGAG AAAGTGGATC GTCGTCACGG CAGTCGCGCT CGCCGGCTGC
GCGGGCCAGC CCGGTGGCGG CGGCATCGGC GCGCCCGATA GCCAGGCCAG TAGCGAAAGC
CGCGACCGCG CGCGCGCTTT CACGGAGCTC GCCGGCGCCT ACTTCGCGCG GGCGCAGTAC
AAGATCGCGC TCGACGAACT GCGCAAGGCG ATCACCGCCG ACAGCCATTT CGGCCCCGCT
TACAACGTCT ACGGCCTCAT CTACATGGAA CTGGCCGAGG ACAAGCTCGC CGAGGACAAT
TTCCGCCGTG CGATCGAGCT CGACCGCAAC GCGTCCGACG CGCGCAACAA CTTCGGCTGG
TTTCTCTGTA CGCGCGGTCG GTACGACGAG GGCCTCGAGC AGTTCCGCAT CGCCTTGCGC
AACCCGCTGT ACGCCCAGCC CGAGCTGGCG ATGGCCAACG CCGGCCAGTG TGCCGAGAAG
AAGGGCGATC TCGCCTTGGC CGAGGCCAAC TTCGTCAAGT CGCTCAAGCT CCAGCCCGAC
AACCCGAACA CGCTGTTGAA GCTCGCCGGA CTGCATTTCC GCCAGGGCCG GCTTGCCGAT
GCGCAGCGCG GGCTCGCGCG CCACGCCGAG CTCGCGCCGC CCAACGCCGA AAGTCTTTGG
CTAGGCGTGC GACTCGAACG ACGTCTAGGG GATCGCGCGC AGGCGGCGGC CTACGGCTTG
CAACTGCGCA AGCGCTTCCC CGAGTCCGAG GAAGCACGCC TGCTGCAGGC GGGGCAGTAC
GAATGA
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| Protein sequence | MVKPELRKWI VVTAVALAGC AGQPGGGGIG APDSQASSES RDRARAFTEL AGAYFARAQY
KIALDELRKA ITADSHFGPA YNVYGLIYME LAEDKLAEDN FRRAIELDRN ASDARNNFGW
FLCTRGRYDE GLEQFRIALR NPLYAQPELA MANAGQCAEK KGDLALAEAN FVKSLKLQPD
NPNTLLKLAG LHFRQGRLAD AQRGLARHAE LAPPNAESLW LGVRLERRLG DRAQAAAYGL
QLRKRFPESE EARLLQAGQY E
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