| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0561 |
|---|
| Symbol | |
|---|
| ID | 3673671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 589424 |
|---|
| End bp | 590827 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637709232 |
|---|
| Product | nitric-oxide reductase subunit B |
|---|
| Protein accession | YP_314319 |
|---|
| Protein GI | 74316579 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3256] Nitric oxide reductase large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000153922 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.745832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACC AATCACAGGC CGTCGCGAAG CCCTATTTCA TCGCGGCAAT CGGTCTTTTT
CTGGGTCAGA TCCTGTTCGG GCTGATCATG GGCTTGCAGT ACGTGGTCGG GGACTTCCTG
TTCCCGGCGA TCCCGTTCAA CGTGGCGCGG ATGGTGCATA CCAACCTGCT GATCGTGTGG
CTGCTGTTCG GCTTCATGGG CGCCGCCTAC TACCTGATTC CCGAGGAATC TGAACGCGAG
CTGCATAGTC CCAAGCTCGC GCTGGCGATG TTCTGGATCT TCCTCGTCGC CGGGGCCGCG
ACCATCTTGG GTTATCTTTT CGTGCCTTAT GCGTCCCTGG CCGAAATGAC CGGCAACAAC
CTGCTCGCGA CCATGGGTCG GGAATTCCTC GAGCAGCCGC TGCCCACGAA GGTCGGCATC
GTCATCGTCG CGCTCGCGAT GCTGTACAAC CTGTCGATGA CCGTGCTGCG TGGCCGCAAG
ACCGCGATCA ACCTCGTGAT GCTGGTCGGC CTCTGGGGCC TCGCGATCTT CTTCCTGTTC
TCGTTCTACA ACCCGGGCAA CCTGGTCAAG GACAAGTACT ACTGGTGGTG GGTCGTTCAC
CTCTGGGTCG AAGGCGTGTG GGAACTGATC ATGGGCGCAA TGCTGGCCTT CGTGCTGATC
AAGGTCACCG GCGTCGACCG CGAAGTCATC GAAAAGTGGC TCTACGTGAT CATCGCCATG
GCGCTCATCA CCGGCATCAT CGGCACCGGC CACCACTACT ACTGGATCGG CGCGCCGGAG
TACTGGCAGT GGTGGGGCAG CGTGTTCTCC GCACTTGAAC CGATTCCGTT CTTCATGATG
ACCGTCTTCG CGTTCAACAT GGTCAACCGT CGTCGGCGTG AACACCCGAA CAAGGCGGCC
GTGCTGTGGG CACTCGGCAC CGGCGTCATG GCCTTCCTCG GCGCCGGCGT CTGGGGCTTC
CTGCACACGC TCGCACCGGT CAACTTCTAC ACCCACGGCA GCCAGATCAC CGCCGCCCAC
GGCCACATGG CGTTCTACGG CGCCTATGCG ATGGTCGTGA TGACGATGAT CAGCTACACC
ATGCCGCTGC TGCGTGGCCG CGTCGCCAAC AGCGCCACGG CGCAGGTCAT GGAGATGTGG
TCGTTCTGGC TGATGACGAT CTCGATGGTG TTCATCACGC TGTTCCTGAC CGCTGCGGGC
ATCCTGCAAA TCTGGCTGCA GCGCATCTCC GACACGCCGA TGCCCTTCAT GGCGGCGCAG
GAGCAGGTCG CGCTGTTCTA CTGGATGCGT GAAGTGGCTG GCCTCGTGTT CCTGGTCGGC
ATCCTGCTCT ACATCGGCAG CTTCTTCGTC AAGGGCAAGG AAGTCACCGT CAGCACCACG
GCGACGGCGG CTGCCGCAGC CTAA
|
|---|
| Protein sequence | MKYQSQAVAK PYFIAAIGLF LGQILFGLIM GLQYVVGDFL FPAIPFNVAR MVHTNLLIVW
LLFGFMGAAY YLIPEESERE LHSPKLALAM FWIFLVAGAA TILGYLFVPY ASLAEMTGNN
LLATMGREFL EQPLPTKVGI VIVALAMLYN LSMTVLRGRK TAINLVMLVG LWGLAIFFLF
SFYNPGNLVK DKYYWWWVVH LWVEGVWELI MGAMLAFVLI KVTGVDREVI EKWLYVIIAM
ALITGIIGTG HHYYWIGAPE YWQWWGSVFS ALEPIPFFMM TVFAFNMVNR RRREHPNKAA
VLWALGTGVM AFLGAGVWGF LHTLAPVNFY THGSQITAAH GHMAFYGAYA MVVMTMISYT
MPLLRGRVAN SATAQVMEMW SFWLMTISMV FITLFLTAAG ILQIWLQRIS DTPMPFMAAQ
EQVALFYWMR EVAGLVFLVG ILLYIGSFFV KGKEVTVSTT ATAAAAA
|
|---|
| |