| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0542 |
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| Symbol | |
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| ID | 3673793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 567554 |
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| End bp | 568264 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637709213 |
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| Product | hypothetical protein |
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| Protein accession | YP_314300 |
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| Protein GI | 74316560 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC AACGCGGCTT CACGCTGATC GAACTCGCGA TCGTGCTCGT GATCATGACC
ATCCTGATCG GGGGGCTCGC GGTTCCGTTG TCGGCTCAGA TTCAGGCGCG GCGGATCGCG
GAAACCAAGC AGACATTGAA CGAAGCGCGC GAGGCGATTT TTGGATATGC GATGGCGCAC
TCAGCCAGCA ATGGCACTGG CGCACCCTAC CTGCCCTGCC CGAACGTCAA TGGCGACGGC
CTCGAAGGGC CCCGCGACGC GGGCAGATGC CTTAACACGG AAGGTTTTTT CCCCTGGGCT
GCATTGGGGA CGGCGGCGCA GGACGCCTGG GGCAACCGTC TGCGGTACGC CGTTACCGAA
GAATTCGCGA ATTCCGTTAC GGGCTTTCAG AACGCAGACG TGGGCGATCG CCAGGTTTGC
ACTACCAGCA CAAATGCGGA TTCTGACGAT TGCGGCGCGC TCGGAAACGT AGCCGCGAAC
GTGCCGATCG TCATTCTTTC CCACGGTCCG AACGGCTGGG GTGCCCGCAA CCTCAACGGA
AATACTTTGG CAGCCCCATC GAGCAATACC GAGCGCGAAA ACACCAACAG CGACCACGTC
GACCAAGAAT TTGTCAGCCG CACGCCTTCA GACGACTTCG ACGACCTCGT GACCTGGATT
TCCGCCGATC AACTCAGGGG GCGGATATGT CCGGGTGGCG GCTGTCCGTA G
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| Protein sequence | MTPQRGFTLI ELAIVLVIMT ILIGGLAVPL SAQIQARRIA ETKQTLNEAR EAIFGYAMAH
SASNGTGAPY LPCPNVNGDG LEGPRDAGRC LNTEGFFPWA ALGTAAQDAW GNRLRYAVTE
EFANSVTGFQ NADVGDRQVC TTSTNADSDD CGALGNVAAN VPIVILSHGP NGWGARNLNG
NTLAAPSSNT ERENTNSDHV DQEFVSRTPS DDFDDLVTWI SADQLRGRIC PGGGCP
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