| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0510 |
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| Symbol | |
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| ID | 3673143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 536115 |
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| End bp | 539900 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709181 |
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| Product | hypothetical protein |
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| Protein accession | YP_314268 |
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| Protein GI | 74316528 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.307496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTT TCCCCGTACC GCCCGCTCTC TGGCGCCGCC TGTGGCGCGG ACTGCTTGCG
CTCGCGGCGC TGGGCGTCGC AGGCGTCGTC GCGGCCGTGG CGCTGATGTT TCTCTATGTG
CTGCCGAACA TCGCCGACCA CCGCGATACG GTCGCCGCGT TGATGTCGCG TGCGGTCGGC
CAGCGCGTCA CGCTCGAGGC GGTGTCCGGC GTGTGGCAGC GCGCACGCCC GGAGTTCCGT
CTGCGTGGCG TGCGCCTGCA CGACGAAGCG GGCGAGACGA CGCTCCTGCT GCCCGAACTC
GAGGCCGAAT TCGCCTGGCG TTCGCTGCTG TTCCTCGAGC CGCGCTTCAG CCGCATCGAA
CTGCAGGGGC TCGCGCTCGA CGTGCGGCGT GACCGCAGCG GCCACTTCTA CGTCGGCGGG
ATCCCGCTAA ATCCGGGCGA TCCGCACGGT GGATTTTCCG GCTGGCTGCT ACGCCAGGGG
CGGGTCCACG TCGGCCAGGC GACGGTGACC TGGCGCGACG CCCTGCGCGG CGCGCCGCCG
CTGACGTTCG AGGGCGTCGA TTTCACGCTC AGCAAGGTGC GGCGCGAACA TCGCCTGCAG
GTCGCGGCGA TTCCGCCCAC CACGCTCGCG CGCCCGCTGC GTGTCGACGC GCGATTCCGC
GCCCGCGACG TCGACGACGT CGCGACCTGG AGCGGGCGGA TCAGCGCCAC CGTTGCCGGG
GTTTCATTTC CCCAGCTTGC GAAGTGGCTC GCGCTTCCCT ATCCGCCGCA GCAGGGTTGG
GGCGCGGTGC ACGCGGACTT CACCTTGGCG CGCGGGGCGA TCACCGGTGT TGAAGCAGCG
GTCGACCTGC GCGAGATCGA AACGACGCTC GGCGAGGGCT TGCTGCCGCT GCGGCTCGCA
CGCCTGCACG GGCGCGCGGC CTGGCAGCGT GTGCGCGGCG GGCAGCGTCT GAGCTTCGAA
GACATCCGCG TGGCGGAGGC AGGCGGCGCG CCCGGGGCGC CGTTCGACGT CGGCGTGGCC
TGGGGCGAAG GCGGGCGCGA AGTCACGGCG CGCTCCTTCA ACCTCGGGCG CCTGCAGTCG
CTCCTTCCGC GGCTGCCAAT CGAGGCCACG CTTCGGTCGC GGCTCGCCGC GCTGCGCCCG
CAAGGCCAGC TCGATGTCTT GCAGCTGCGC TGGGCCGGCG CGAAGCCGAC ACTCGACGAC
TTCGCCGTCA AGGCGCATTT CCGCGGTCTG GCGATACGCG CGGTCGACAA GCGTCCGGGC
GTGCGCAACC TGAGCGGGCG CATCGAAGGC GACGCGCACG CGGGCGCGTT CGAGATCGAG
TCGCGGCGTG TCGGGCTCGA TCTGTCGGCG TGGTTCCGCG AACCCGAGTT CGCGCTCGAC
ACGCTCCACG CGCGCGGCAG CTGGAACAAG ACCGCGCGCG GCCAGCGCCT GACGCTTGCC
GCTGCACGCT TCGACAACGC CGATGCGGCG GGGACGGCGA CGGGACAGTA CGAACGCATT
CCGGGGCAGC GCGGCATCAT CGATCTGAAC GCGCATCTGG ATCGCGCGCG CGGGACCGCG
GTCTACCGCT ATTTTCCGAA GACGATCGGC GAGCGCACCG TCGACTGGGT CAGGCGCGGC
GTCGTCGCCG GCGGCTCGGA CGACGTGCGG CTCAAGCTCA GGGGCGACCT CGCGCGTTTC
CCATTCGCCG ACGGCGACGG CGTGTTCCGC GTCGACGTCA AGGTCAGTGA CGGCGTGATC
GACTACCTGC CAGGGTGGCC GCGCATCGAA GGCATCGACG CCCACCTCGC TTTCGCGGGC
AAGACAATGG AAGTCAGCTC GAACACCGCG CGCATTTACG GCGTCGCGCT CGCCCCGGTG
AAGGTCGTCA TTCCCGATCT CATCCATCAC GACGAGCTGC TGCAGGTCGA CGGCGAGGCA
GCCGGTCCGG TCGAAGACTT CATTCGGTTT GCCAACGCGA GTCCGCTCGG CGACCGCCTA
CGCGTCTTCA CCGCCGGCCT CAAGGGCACC GGAAACATGA AGCTTGCGCT CGGTCTGCGC
GTGCCCTTGC GCCGCAGTGC GGACGTCAGC GTCGCCGGAC GGCTTTCCTT CCTCGACGAC
AGCCTGGCGT CGAGCGCGTG GCCGCGGCTC GAGAACGTGC GCGGCGACGT CGACTTCACC
GGCGACAGCC TCAGCGCGCA GAACCTCGGC GCGCGATTCC TCGGTGGCCC GCTGCGCCTC
GACGCGCGCA CGGTCGGCGA CGAGGTGCGC ATCGTCACCC GCGGCCGCGC GACGGCGCCG
GGCATCGCGG CGTGGCTCGG CCCGACCTGG GGCAGCCGCC TCAGCGGGCA GACCGTTTGG
GACGGCGAAC TCGTGCTTGC GCCGGGCGGC GAGCGCATGC GTGTCCAGTC CGACCTCGTC
GGCCTGCGCA GTGCACTGCC GGCACCGCTC GCGAAAGCCG CCGCCCAGCC GCTGCCCTTG
CGCGTGACGG GCCAGCCTCA TGCCGACGGC CGGCAATACG ACGTGCGCCT CGGCACGCGC
CTCGGCGCGG CCTGGCACGC GTCGGCGGCC GGCGTGACGC AGGGCGAGGT CCGCTTCGGC
AGCGCCGCGA CGCTGCCGGA CGAACCCGGC CTGCGACTCG CTGGACGCGC GCCGAACCTC
GACCTTTCGG CCTGGCTCGA GCTGATGCCG CGCGGCGAGG GGGCGGCGCT GCCCATATCG
TCAGTCGATC TCGGGTTCGA CGCGTTCGAC CTGGCCGGAC GCCGCTTTGA GGACCTGCGC
CTCCAGGGAG GCGCGCAAGG CGGCGCGCTG CGGACACAGG TCACGGCACG CGGCATGGAC
GGCGTGCTGA CCTATGGCGC CGGAGACGAC GGGCGGGCGC GCGTCGCCGC CCGGTTCCGC
GAACTCACCA TTCCGGCGCC TGCGCCGGCG GGCGCGTCGA CCGATCCCCA AACGAACATG
AAGGCGAGTG ATTTTCCCGC GCTCGAAATG CGTGTCGATG ATTTTCGCCT GCAGCAGCGC
CCGCTCGGCC GGCTCGATCT CGTCGCCCAT GGCGCACCCC AGGGGCTCAT CATCGAGAAC
CTGAAGCTCG CGCACGCCGA CAGCGTGTTC GCCATGAACG GGGTGTGGCG TGACAGCGGC
GCCGGGGAGA CGCGGGGAGA GCTGAGCCTC GAGGTCGTGG ACGCGGGCAA GTTTCTGGCG
CGCTTCGGCT ATCCGGACAC GCTGCGCGGC GGCCGTGCGA GCGTACGCGG CGACGCCGCG
TGGGAAGGGT CGCCGGCCGA TTTCTCGTTC GCAAGCCTTG CCGGACAGCT CGCGTTCAGC
GCGAAAGGCG GGCAGTTCCT GCGTGTCGAG CCGGGCGTCG GCAAACTGCT CGGTGTGCTG
AGCCTGCAGT CGCTGCCGCG CCGATTGAAC TTCGATTTCC GTGATATCTT CAACAAGGGC
TATGCCTTCG ACGACATCGG GGCGACGCTG CGGGTCGCCC GCGGGGTCGT CTACAGCGAC
GATTTGAAGA TGCGTGGTCC GGCGGCGAAG GTCAACATGT CGGGCCTTGC CGATCTCAAC
CAGGAGTCGG TGCAGTTGCG GGTCAAGGTG ATTCCCAAAA TGTCCGAAGG AGTGGCCGTC
GCGGGCGCCC TGCTCGGCGG GCCGCTTGCG GGCGTGGGGG CACTCGCGGC GCAAAAGCTG
CTGCGCGACC CGCTCGAAGA GGTCATCAGC CAGGAATACA TGGTGACCGG GCCGTGGCAG
GCGCCCGACG TCAAACGTCT CGCCAAAACC AAGGTCGAAT CCAAACCCCC CGTAGCCGAA
CCCTGA
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| Protein sequence | MTVFPVPPAL WRRLWRGLLA LAALGVAGVV AAVALMFLYV LPNIADHRDT VAALMSRAVG
QRVTLEAVSG VWQRARPEFR LRGVRLHDEA GETTLLLPEL EAEFAWRSLL FLEPRFSRIE
LQGLALDVRR DRSGHFYVGG IPLNPGDPHG GFSGWLLRQG RVHVGQATVT WRDALRGAPP
LTFEGVDFTL SKVRREHRLQ VAAIPPTTLA RPLRVDARFR ARDVDDVATW SGRISATVAG
VSFPQLAKWL ALPYPPQQGW GAVHADFTLA RGAITGVEAA VDLREIETTL GEGLLPLRLA
RLHGRAAWQR VRGGQRLSFE DIRVAEAGGA PGAPFDVGVA WGEGGREVTA RSFNLGRLQS
LLPRLPIEAT LRSRLAALRP QGQLDVLQLR WAGAKPTLDD FAVKAHFRGL AIRAVDKRPG
VRNLSGRIEG DAHAGAFEIE SRRVGLDLSA WFREPEFALD TLHARGSWNK TARGQRLTLA
AARFDNADAA GTATGQYERI PGQRGIIDLN AHLDRARGTA VYRYFPKTIG ERTVDWVRRG
VVAGGSDDVR LKLRGDLARF PFADGDGVFR VDVKVSDGVI DYLPGWPRIE GIDAHLAFAG
KTMEVSSNTA RIYGVALAPV KVVIPDLIHH DELLQVDGEA AGPVEDFIRF ANASPLGDRL
RVFTAGLKGT GNMKLALGLR VPLRRSADVS VAGRLSFLDD SLASSAWPRL ENVRGDVDFT
GDSLSAQNLG ARFLGGPLRL DARTVGDEVR IVTRGRATAP GIAAWLGPTW GSRLSGQTVW
DGELVLAPGG ERMRVQSDLV GLRSALPAPL AKAAAQPLPL RVTGQPHADG RQYDVRLGTR
LGAAWHASAA GVTQGEVRFG SAATLPDEPG LRLAGRAPNL DLSAWLELMP RGEGAALPIS
SVDLGFDAFD LAGRRFEDLR LQGGAQGGAL RTQVTARGMD GVLTYGAGDD GRARVAARFR
ELTIPAPAPA GASTDPQTNM KASDFPALEM RVDDFRLQQR PLGRLDLVAH GAPQGLIIEN
LKLAHADSVF AMNGVWRDSG AGETRGELSL EVVDAGKFLA RFGYPDTLRG GRASVRGDAA
WEGSPADFSF ASLAGQLAFS AKGGQFLRVE PGVGKLLGVL SLQSLPRRLN FDFRDIFNKG
YAFDDIGATL RVARGVVYSD DLKMRGPAAK VNMSGLADLN QESVQLRVKV IPKMSEGVAV
AGALLGGPLA GVGALAAQKL LRDPLEEVIS QEYMVTGPWQ APDVKRLAKT KVESKPPVAE
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