| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0468 |
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| Symbol | |
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| ID | 3673101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 489968 |
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| End bp | 491245 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709139 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_314226 |
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| Protein GI | 74316486 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.895394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGT TGCCGTTCGT GGCGCTGGCC TTGCTCGGCG TGCCGCTCTT CGTCGTGCTG
GGCGCGGCGG CGCTCGTCGC GACCCGCGAT GCGCAACTCG ATTCCGCGCT CCTGATGGTC
GAGTTCGCGC GGCTCGCCGC ATCACCCAAT CTGGTCGCGA TTCCGCTCTT CGTGCTCGCC
GGCGCGACCA TGGGGCACGG CGGCGCCGGG CGCCGCCTGG TCCGCTTCTT CAACGCCTTG
CTCGGATGGA TGCCGGCGGG CATCGCCTGG GTTGCCGCCG CGTCGTGCAT GCTCTTCACC
GCTTTTTCCG GCGCGTCCGG CGTCACGATC CTCGCGCTCG GCGGTCTGCT GTATCCGATG
CTCAAGGACG AGGGTTACCC GGAACGCTTC GCGCTCGGGC TCATCAGTTC GGGCGGCTCC
ATGGGGCTGC TGCTGCCGCC CAGCCTCGCG GTGCTGCTCT ACGGCGTCGT TGCCCAGGTC
GATATCGGCG ATTTGTTCGT CGCCGGCCTG CTGCCGACGC TGCTGCTGTT CGTGATGGTC
GGGAGTTATG CCGTCCGGCG GGGCGCGCGC GGGGCGCCGC GTCACCGCTT CCGATGGCGC
GAACTCGCGG CCGCGGCGCG CGCGGGCTGG GCCGATCTGC TGCTGCCGAT CGGCGTCGTT
GCGGGCCTGG CTGCCGGGCT GTTGACCGTC GCCGAACTCG CCGCATGCAG TGCGCTCTAC
GCGCTCGTGC TCGAAACAGT GGTTCACCGC ACGATCCGCG CGAAAGAACT CGCGTGGGTG
GGCTACGAAG CGGCGACGCT GGTCGGCAGC ATCTTCGTCA TACTCGGCTT GAGCCTCGGA
CTGACCAATC TGCTGGTCGA TGCCCAGGTG CCGATGCGCT TGCTCGATTG GGTCGTCGAG
CAGGTGCACA GCCCGCTCGC TTTCCTGCTC TGGATGAACG CCGTCCTGCT CGTGGTGGGC
TGCATGATGG ATATCTTTTC CGCGATCGTG ATCGTCACGC CGCTGCTCCT GCCGCTCGCG
ACCCATTTCG GGATCCACCC GCTGCACCTC GGCATCGTGG TTCTGGCGAA CCTCGAGATC
GGCTATCTGA CACCGCCCGT GGGCATCAAC CTCTACCTTG CCAGCCAGCG CTTCAAACAA
CCCGTGCTCA CGGTGTTCCG TGCGACGCTG CCGTTCCTGC TGCTGCTGCT CGTCTGGCTG
CTACTCCTCA CCTACGTGCC CGCGCTGAGC CTCTGGAATC AAGGCATGCA CGGTGCGGCG
GCTCAGCTTC CGCTGTAG
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| Protein sequence | MTLLPFVALA LLGVPLFVVL GAAALVATRD AQLDSALLMV EFARLAASPN LVAIPLFVLA
GATMGHGGAG RRLVRFFNAL LGWMPAGIAW VAAASCMLFT AFSGASGVTI LALGGLLYPM
LKDEGYPERF ALGLISSGGS MGLLLPPSLA VLLYGVVAQV DIGDLFVAGL LPTLLLFVMV
GSYAVRRGAR GAPRHRFRWR ELAAAARAGW ADLLLPIGVV AGLAAGLLTV AELAACSALY
ALVLETVVHR TIRAKELAWV GYEAATLVGS IFVILGLSLG LTNLLVDAQV PMRLLDWVVE
QVHSPLAFLL WMNAVLLVVG CMMDIFSAIV IVTPLLLPLA THFGIHPLHL GIVVLANLEI
GYLTPPVGIN LYLASQRFKQ PVLTVFRATL PFLLLLLVWL LLLTYVPALS LWNQGMHGAA
AQLPL
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