Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0324 |
Symbol | |
ID | 3672110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 347525 |
End bp | 348010 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637708985 |
Product | transmembrane protein |
Protein accession | YP_314082 |
Protein GI | 74316342 |
COG category | [S] Function unknown |
COG ID | [COG5488] Integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0115837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG TGGATCCGGA AGACTGTGTA GGCGAGGCGG CGGGCGCCTT CGTGTTTCGA TCGCGTCCCA ACTGTTCGCT GACCTCGGCC CAGGAACAGC TCGCCCTGTG GAGCCTCGCG GCCCCGTGCG GTGCGGCGGC GATCGCCTTT GCCCTCGCGG GCTACTGGAT CATCCTGCTC TACGCGGGAT TGCAAGTGGG CGTGCTCGCA TGGGCGTTCA GAGCGCTGCG CGAGCGCAAG GACGATTACG AGCGCCTGAC GATCGACGGC GACAGGGTCG TGCTGGAATG GCGCAGCCGC AAACGCGAAG GCCGGCGCGA GCTGAATCGG CAGTGGACGC GGGTGCGCTG CACCTGCGCG GCCCCCGGGC GGAATTGCCG TGTTGGCGTC TGCTGTTACG GGCGCGAAAC ATTGGTCGGA CAGTATCTGA GTGACGAAGC CCGGCTCCGG CTGGCCGCGA CGTTACGCAG CAAGTTGCAG GCATAG
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Protein sequence | MKQVDPEDCV GEAAGAFVFR SRPNCSLTSA QEQLALWSLA APCGAAAIAF ALAGYWIILL YAGLQVGVLA WAFRALRERK DDYERLTIDG DRVVLEWRSR KREGRRELNR QWTRVRCTCA APGRNCRVGV CCYGRETLVG QYLSDEARLR LAATLRSKLQ A
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