| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0231 |
|---|
| Symbol | |
|---|
| ID | 3671373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 253043 |
|---|
| End bp | 253807 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637708892 |
|---|
| Product | LytR/AlgR family transcriptional regulator |
|---|
| Protein accession | YP_313989 |
|---|
| Protein GI | 74316249 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.740894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGAC CCAACCCGCC ACTTCGCGTC CTCATCGTCG ACGACGAGGC GCCGGCACGC
GCGCGGCTCG GTGACGTCCT GGCCGACTGC GCCGGGCGTC TGCCGGTCGA GGTCGTCGGC
GAGGCCGAGA ACGGTCTCGC GGCGTTGGCG CTGGCGCAGC AGACCGCGGT CGACGCCGTG
CTGCTCGATA TCCGCATGCC GGTCATGGAC GGCCTCGAGT GCGCCGCGCA TCTGAACCGG
CTCGCCGCGC CCCCCGCGAT CATCTTCAGC ACGGCCTATG ACGCCTACGC CTGCCAGGCC
TTCGACCTCA ATGCCGTCGA CTATCTGCTG AAGCCGGTAC GGGCCGAGCG CCTCGTTCGC
GCACTGTCGC GCGCGCATCG CCTGAGCGCG AAGACTCTCG ATCAGTTGCG CGAGGCGCAC
CCCAAGGCGC GCACCCACCT GTCGCTGAAC GAAAAAGGCC GCATCGTGCT GATTCCGGTC
GCGGACATCC TTTACCTCAA GGCCGAGCTC AAGTACGTCA CCGTGCGCAC GGCCGCCCGC
GAGTTCCTGA TCGAAGAATC GCTGACCCAG CTCGAAGCCG AGTTCGGCGA GCGTTTTCTG
CGTATCCATC GCAACTGCCT CGTCGCGCGC GACCGCGTCC GCGAGGTCGG CAAATCACCG
GGCGAAGACG AGGGCCACTT CCTGCGGCTC GACGGGCTAG ACGAGCGGCT CACCGTCAGC
CGTCGCCAGT ACACGGCGCT GCGCGAAACG CTCCGAGCTT TCTGA
|
|---|
| Protein sequence | MNGPNPPLRV LIVDDEAPAR ARLGDVLADC AGRLPVEVVG EAENGLAALA LAQQTAVDAV
LLDIRMPVMD GLECAAHLNR LAAPPAIIFS TAYDAYACQA FDLNAVDYLL KPVRAERLVR
ALSRAHRLSA KTLDQLREAH PKARTHLSLN EKGRIVLIPV ADILYLKAEL KYVTVRTAAR
EFLIEESLTQ LEAEFGERFL RIHRNCLVAR DRVREVGKSP GEDEGHFLRL DGLDERLTVS
RRQYTALRET LRAF
|
|---|
| |