| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0220 |
|---|
| Symbol | |
|---|
| ID | 3671362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 243329 |
|---|
| End bp | 244264 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637708881 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_313978 |
|---|
| Protein GI | 74316238 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2354] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0663803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAA CCAGCCTTCT CGCCCTGCTC GACGACATCA CCACCGTCCT CGACGACGTG
TCGGTACTGA CCAAGGTCGC CGCCAAGAAG ACCTCGGGCG TGCTCGGCGA CGACCTCGCA
CTCAACGCGC AGCAGGTCGC GGGCCTCAAG GCCGAACGCG AACTGCCGGT GGTATGGGCC
GTGGCCAAGG GCTCTTTCCG CAACAAGCTG ATCCTCGTCC CGGCCGCACT CGCGATCAGC
GCGCTTGCGC CCTGGGCGAT CACCCCGCTG CTGATGCTCG GCGGCGCCTT CCTTTGCTAC
GAGGGTTTCG AGAAACTCGC GCACAAGTTT CTCCATAGCC GAAGTGAAGA CGCGGCCCAC
CATGCCGAAC TCACGCAGGC GCTCGCCGAC CCGGCGGTCG ACCTCGTGGC GCTCGAGCGC
GACAAGATCA AGGGCGCGAT CCGCACCGAC TTCATCCTCT CGGCCGAGAT CATCGTCATC
ACGCTGGGCA CCGTCGCCGC GGCGGCGTTC GGCACCCGCG TCGCCGTGCT CGCCGGCATC
GCGCTGCTGA TGACCGTCGG CGTCTACGGT CTGGTGGCCG GCATCGTCAA GCTCGACGAC
GCCGGCCTCC ACCTGAGCCA AAAAACGGGC GGCCTTCAGC GAGCGCTCGG GCGCGGCATT
CTGCGCGCGG CCCCCTACCT GATGAAAACG CTCGCCATCG TCGGAACGGC CGCGATGTTC
CTGGTCGGCG GCGGCATCCT CGTGCATGGC ATTCCGGCCG CGCACCATGG CGTCGAGGCG
CTCGCCCATC AGGCTTCGGC GCTGCCCGGG ATCGGCGGGG CGCTGGGCGT CCTCGCTCCC
CTCGTCATCG ACGCACTGGT CGGGATCCTC GCGGGGGCCC TGATTCTCGG CGTCGTGACG
ATCGTGCGCC GCCTCAGGCG CCGGTCGGCC GCCTGA
|
|---|
| Protein sequence | MAGTSLLALL DDITTVLDDV SVLTKVAAKK TSGVLGDDLA LNAQQVAGLK AERELPVVWA
VAKGSFRNKL ILVPAALAIS ALAPWAITPL LMLGGAFLCY EGFEKLAHKF LHSRSEDAAH
HAELTQALAD PAVDLVALER DKIKGAIRTD FILSAEIIVI TLGTVAAAAF GTRVAVLAGI
ALLMTVGVYG LVAGIVKLDD AGLHLSQKTG GLQRALGRGI LRAAPYLMKT LAIVGTAAMF
LVGGGILVHG IPAAHHGVEA LAHQASALPG IGGALGVLAP LVIDALVGIL AGALILGVVT
IVRRLRRRSA A
|
|---|
| |