Gene Tbd_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0218 
Symbol 
ID3671360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp238815 
End bp239243 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content69% 
IMG OID637708879 
Producthypothetical protein 
Protein accessionYP_313976 
Protein GI74316236 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.181658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTT GCCCGCTATG CGACACCCCG GGCGGGACGA TCCTGTGGCA GGACGATTTC 
TGCCGCGTCG TCCTCGCCGA CGAGCCGGAC TATCCCGGCT TCCTCCGCGT GATCCTCGCC
GCCCACGTGA AGGAAATGAG CGATCTCGCG CCAGCCGACC AGCAGCGCCT GCTGCAGGTC
GTACTCGCGA CCGAAGCCGC GCTGCGCGAG GTCGTGGCGC CCCACAAGGT CAATCTCGCC
TCGCTCGGCA ACCTGGTGCC GCATCTGCAC TGGCATGTGA TCCCGCGTTT TACCGACGAC
CCGCATTTCC CGAATGCGGT GTGGGGCGTG AGGCAACGGG ATACGCCGCG CGCCGCAGCG
CCCGACCTGG ACGCGCGGCT TGGCGCGGCG CTCAGGCGGC GCCTTGGTCG CGCGCAGGAA
ACGGAATGA
 
Protein sequence
MPACPLCDTP GGTILWQDDF CRVVLADEPD YPGFLRVILA AHVKEMSDLA PADQQRLLQV 
VLATEAALRE VVAPHKVNLA SLGNLVPHLH WHVIPRFTDD PHFPNAVWGV RQRDTPRAAA
PDLDARLGAA LRRRLGRAQE TE