| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0142 |
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| Symbol | |
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| ID | 3673286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 150379 |
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| End bp | 151452 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637708802 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_313900 |
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| Protein GI | 74316160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.133339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCTG ATTTTGTCCT CACCCGAGCG AGCGCCCTGC GCACTGGCCT GATCCTCGCG
CTGGCCGGTC CGCTGACGGC CGTTGCGGCC GACGTGCTGG CGCTCACCCC GGCCCAGAAG
AAGAACCTCG GCGTCGAGAT TGCGCCGCTT TCCGCCGCCG CGGCGAGCCC CGCGCTCACG
TATCCGGCGC GCGTCACCCT GCCCCCGGCC AGCCTGCGCG TCGTCGCGGC CGCGGGCGAC
GCGCTTGTGA CGCGGCTGCA CGTGCAGCCC GGCGATACGG TCCGCCGCGG CGCGCCGCTC
GTCACGGTCG CGATGCCGGC GCTCGCCGAA GCGCAGAACC AGCTCACCCA GGCGCAGCTC
AGGGCGCGGC TCGCCGCCGA AACCGAGGCG CGCGACCAGA AGCTCTTTGC CGAAGGCCTG
ATCGCCGAAT CGCGGCTGCG CGCAACGCAG TCGGCGGCGG CGTCGGCGCG TGCCGATCTC
GCCGCGGCGC GCGCCGCCCG CGCGCTGCTC GGCGCGGGCA ACGCGGCCGG CAGCGCGCTT
ACGCTCGTGG CGCCGATCGC CGGGGTCATC ACCGAGAGTG CCGCCGAGCC CGGGCAGCGC
GTCGACGCCG GAACGGTCTT GTTCAAGGTC GCCGACCTGT CGAAGCTCGC GCTCGAGATT
CCCTTGAGCA CGACGCAGTC GCGCCAGGTC GCGGCCGGGC AGCGCGTAAG CGTCGTCGAC
AGTGCGGCGA CGGGTCGCAT CACGGCGCTG TTGCCGCAAC TCACGGCGGC GCAAAGCGTG
GTCGCACGGG CGAGCCTCGC TGACCCGCAG AACCTGCTGC GTCCGGGCCA GTCGGTGCAG
GTCGCGATCG CCGGGACGCA CGCGGCCGAG AGCCTGACCG TGCCGGCGGG TGCGCTCGTG
TGGAAGGGCG AAGCGTCCTA CGTCTTCGTC GACACCGCGA AAGGCCTCGT TCCGACGGCC
GTGCGCGTGC TGCGCCGCAA CGCGACCGCC GCCGAAGTGA GCGGTCTCGC GCCCGGGAGC
CGCGTCGCCG TGCGCGGCGT GGCGGCGCTC AAGGCGCAGT GGGCGGGGGA ATAG
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| Protein sequence | MIADFVLTRA SALRTGLILA LAGPLTAVAA DVLALTPAQK KNLGVEIAPL SAAAASPALT
YPARVTLPPA SLRVVAAAGD ALVTRLHVQP GDTVRRGAPL VTVAMPALAE AQNQLTQAQL
RARLAAETEA RDQKLFAEGL IAESRLRATQ SAAASARADL AAARAARALL GAGNAAGSAL
TLVAPIAGVI TESAAEPGQR VDAGTVLFKV ADLSKLALEI PLSTTQSRQV AAGQRVSVVD
SAATGRITAL LPQLTAAQSV VARASLADPQ NLLRPGQSVQ VAIAGTHAAE SLTVPAGALV
WKGEASYVFV DTAKGLVPTA VRVLRRNATA AEVSGLAPGS RVAVRGVAAL KAQWAGE
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