| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1467 |
|---|
| Symbol | |
|---|
| ID | 8631324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1528360 |
|---|
| End bp | 1529358 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | TRAP transporter solute receptor, TAXI family |
|---|
| Protein accession | YP_003317979 |
|---|
| Protein GI | 269793075 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCATGA GGCGATTGGT TGTTTCGTTG TTTGCCCTGG CCCTGGTGGT TGGGGCCGTT
TCGGCTGTCT TCGCGGCCCC GGCTCCCAAG GCGGGGTGGC CCTCGCAGCT GAAGTTCATG
GCGGGACCTC CCGGGGGTAA CTGGTTCGCC CTGGGTAACG CCTTTGCGGA CATGTGGAGC
CGGGAGGTGC TTCAGACCAC CAGTAGCTCC GGAGGCGGGG TGGCCAACAT AATAAATGCG
GACACCAAGA AGGGGGACCT GGGCTTCTCG GTGACCTCCC TGCTGGGTGC GGCCATCAAG
GGGGAGCAGG ACTTCCTGGG CCGTCCTGTC AAGAACGCGG TTGTCATGGC CAACCTGTAC
ACCCAGTACA CCTACTTCAT CATGCGGAAG GACTTCGCTC AGAAGCACGG CATAACCAAG
CTGGGTGACG TATTCCGCAA GAAGGTGCCG GTGAGGATGG CCACGTTGAA GCCCGGCACC
GCATCGGAGT TCGTGGTCAA GTCCCTGTTC ATGAAGGGCT ATGGGGTAAC CTATAAGGAC
ATAAAGAAGA TGGGTGGCTC CGTGGAGTTC GCCTCCTACG ACGGGGGAGC GGACCTTCTG
GCGGACAACC ACATAGACAT GTTCGCCTTC TCGGTGGGCA AGGTGGCCTC CATAGTGATG
AACATCGAGA GCAACACCAA CGTGGTGATC CTCCCGGTGG ACGACGATGC CCTGAAGGCC
CTGTCCGACG CCTACGGCAC CGAGACCTTC ACCATAAACC CCGGCATATA CAAGAGCGTC
ACCAAGCCGG TGAAGACCGT GGGGGACTAT ACCTGTGTGG TCATAAGGAA GGACTTGCCG
GAGAACCTGG TTTACGAGCT GTGCAAGGCC CTCTGGAAGA ACAAGGACAA CCTGGCCAAG
GCGGTCCAGG ACATGAAGGA GCTTAACCCC AAGGAGGCGA TCCCCAAGGG GGTTCCGGCC
CATCCGGGGG CGGTGCGCTT CTGGAAGGAG GCCAAGTAG
|
|---|
| Protein sequence | MSMRRLVVSL FALALVVGAV SAVFAAPAPK AGWPSQLKFM AGPPGGNWFA LGNAFADMWS
REVLQTTSSS GGGVANIINA DTKKGDLGFS VTSLLGAAIK GEQDFLGRPV KNAVVMANLY
TQYTYFIMRK DFAQKHGITK LGDVFRKKVP VRMATLKPGT ASEFVVKSLF MKGYGVTYKD
IKKMGGSVEF ASYDGGADLL ADNHIDMFAF SVGKVASIVM NIESNTNVVI LPVDDDALKA
LSDAYGTETF TINPGIYKSV TKPVKTVGDY TCVVIRKDLP ENLVYELCKA LWKNKDNLAK
AVQDMKELNP KEAIPKGVPA HPGAVRFWKE AK
|
|---|
| |