| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1443 |
|---|
| Symbol | |
|---|
| ID | 8631300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1500442 |
|---|
| End bp | 1501431 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_003317955 |
|---|
| Protein GI | 269793051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.423099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGT GGATCCTTGC TTTGGTTCTG ATGGTAGCCC TGGTGCCCGC CGCATTCGGG
GCGGAGATGA CCCTCAAGTT CGCCGGTCAG TATCCGGCTG ATCACCCGGG AAGCAAGCTG
ATGAGGGACG TGGCCTCGGA GATACTCAAG CGGACCGACG GGAGGATAGC GGTGCGGGTC
TACCCGGGTA ACCAGCTGGG GGACTACACC CTGGTCTACG AGGAGCTCAT AAAGGGGACC
ATAGACATGG CCCTCATATC GGTCCCCAGC CAGTTCGACC CGAGGCTGGA GCTCATGTAC
GTGAACGGCT ACGTGCGGGG CTACGAGTCC GCCAAGAAGA TCTTCGCCCC CTCGGGCTGG
CTGTTCAAGA AGATGGACGA GCTGAACGGC AGGCTCGGGG TTAAGCTGTT GGGCTTCTAC
GTGGAGGGCA TGATAGGAAC CGGCACCACC AAGCCCGCCA AGGAGCCCCT GAACCCCAAG
GTGGACAAGG GGCTTCTCTG CCGGGTCCCC AACATGGACG TCTACAAGCT GGGGGCGGAG
GCCCAGGGCT ACAGGACCAT AACCATCCCC TATGCGGACG TCTACCAGGC CATGCAGACC
GGGGTGTGTG ACGCGGTCAA CGGCTTCGCC ACCACCGCGG CCCTCACCGC CCTGGGGGAC
GTCATAAAGT ACTGGTACGC CACCAACTAC TCCATGGAGT GCATCAACTT CCTCATGAGC
AAGAAGGTCT GGGACAAGCT CAAGCCCAAG GACCAGAAGA TCATAGCGGA AGTGATGACC
AAGGCCACCC TGAAGAGCAT CGATGCGGCC AAGGCGCTGG ATGAGGCCTC CATGAAGGCC
ATGGAGAAGA AGGGGATAAA GGTCTTCCGC TACAGCGAGG CGGAGCTGCT GCCCATCTCC
AAGGCCATAG CGGAGACCTG GCCCAAGCTG GAGAAGAAGA TGACCAAGGA GCTCATGGAC
GAGTTCCGCA AGAACCTGGC CCCCAGGTGA
|
|---|
| Protein sequence | MRKWILALVL MVALVPAAFG AEMTLKFAGQ YPADHPGSKL MRDVASEILK RTDGRIAVRV
YPGNQLGDYT LVYEELIKGT IDMALISVPS QFDPRLELMY VNGYVRGYES AKKIFAPSGW
LFKKMDELNG RLGVKLLGFY VEGMIGTGTT KPAKEPLNPK VDKGLLCRVP NMDVYKLGAE
AQGYRTITIP YADVYQAMQT GVCDAVNGFA TTAALTALGD VIKYWYATNY SMECINFLMS
KKVWDKLKPK DQKIIAEVMT KATLKSIDAA KALDEASMKA MEKKGIKVFR YSEAELLPIS
KAIAETWPKL EKKMTKELMD EFRKNLAPR
|
|---|
| |