Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1214 |
Symbol | |
ID | 8631063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1263113 |
End bp | 1264750 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | phosphoesterase RecJ domain protein |
Protein accession | YP_003317728 |
Protein GI | 269792824 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0990291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGTTCT GCGGAATAGA CGAGATAGAC ATCACCCCCC GAAGGGAGAC CCCAGGGGGG GCGATGTCGC AGTTCCTATC CGCCGTGGCG GGGATCCGGG GCTGGGGGGA GGAGGAGTTC CTATCGTGGC TCTGGGCGGA CCTCCAGCAG GAGCTGGAGG CGATCCCGTT GGCGGAACCG GAGGTCCGGG CCCTGCAGGT CATATCATCC GTGAGGCCCG GGGAGCGGGT CATAATATAC GGGGACTACG ACGTGGACGG ACTCTCCGCC ACCACCCTGG CGATGGAGCT CATGCTGGCC CGGGGGGCTG CGGTGCGTTA CTTCATCCCC CATCGCTTCC TGGAGGGCTA CGGCTTCCAC GTGAACACCG CCCGGAAGAT AGCCGCCCGG GGGTGTGACC TGCTGCTGGT GGTGGACTGC GGCACCAAGG ACGTGGAGGC CCTGGAGGTC ATAGACCAGG CGGGGATCCC AACGGTGGTG TTCGATCACC ACACCCCGGG GGATGGTCTA CCCAAGGGAG TCCTGGTGAA CCCGCACTGC TTCGACCTCC CCACCCCCCT CACGGCCCTC TGCGCCGCCG GGGTCCTCTG GTCATGGATA TGGCGAAGCC GAATAATGGA CAGGTCCTGG ACCGCCGCCC GGCTGGACCT GGCCTGTCTG GCCACCGTGG CGGACTGCAT GGACCTGTCG GTGCCGCTCA ACCGGTGCAT CGTCAAGGAG GGCCTCAAAC TGATCCGCCG GAGCCCCAGG AGGGGCATAG GTGCCCTGCT GGGTAGGCTC GGGGTGGAGC CCCAGGACGT GGACGAGGAG GTCCTCTCCA TGAAGCTGAT CCCCTGCCTC AACGCCCCGG GCAGGCTGGA CCTGGCGGAG GAGGCGGTGA GGCTCCTCTA TCCCGGGGAC GGATCGGTGG AGCCCCTGGT GGACCGGGTG CTGTCCCTGA ACGAGGAGCG GCGCCGCCTG TCCTCCGTGA TAATGAAGGA CGCCCAGGGG GACCTGGACC GGCACGTCTA CCACGGCAAG GACTGGCCCG TGGGGGTCCT GAGCAGCGTG GCCAGCCGGC TCTGCAACGA CCGGGGCCGC CCGGTGGCCC TGGTGGCCCC CGCGGGGGAT GGCCTTAGGG GTACCCTTAG GATCCCCAAC GGCGCCGGCG ATGCGGTGAA GATATTGAGT CGCATGTCCC ACATGCTAAG CGCCTTCGGT GGACACCGCT GCGCCGCTGG GTTCTCGGTG CAGCGCCACC ATTGGGAGGC GGTCAGAGAG GGGCTTGAGG CTGCATTGAG GGAGCTCCCC TCCGACCGGT GCCGGCTGGA CGTGATCCAC TGGCCCCTGG ATCGGATAGA CCAGTCCATG GAGGAGGACC TGGACGCCCT GGGCCCCTTC GGAATGGGGA ACCCGGCGCC CCTCCTGTAT CACCCCGGGG GCTTCCAGGT GGAGCCCATG GGGAGGACCG GCCGGGTCAG CAAGCTGCTG GCCCAGGGGA GGGAGATAGT GGCCTTCGCC TCCCCCCTGG AGCTCCAGGG GATGGAGGCC AGGGGGATAG TGTACAGGCC CAAGATGGAG GCCTGGCGGG GCAGGCGCCG ACTCAAGCTG TACCTGGAGA AGGTGGTCCT GTCCTCCGGG GAGGGGGTGG ACCGTTGA
|
Protein sequence | MMFCGIDEID ITPRRETPGG AMSQFLSAVA GIRGWGEEEF LSWLWADLQQ ELEAIPLAEP EVRALQVISS VRPGERVIIY GDYDVDGLSA TTLAMELMLA RGAAVRYFIP HRFLEGYGFH VNTARKIAAR GCDLLLVVDC GTKDVEALEV IDQAGIPTVV FDHHTPGDGL PKGVLVNPHC FDLPTPLTAL CAAGVLWSWI WRSRIMDRSW TAARLDLACL ATVADCMDLS VPLNRCIVKE GLKLIRRSPR RGIGALLGRL GVEPQDVDEE VLSMKLIPCL NAPGRLDLAE EAVRLLYPGD GSVEPLVDRV LSLNEERRRL SSVIMKDAQG DLDRHVYHGK DWPVGVLSSV ASRLCNDRGR PVALVAPAGD GLRGTLRIPN GAGDAVKILS RMSHMLSAFG GHRCAAGFSV QRHHWEAVRE GLEAALRELP SDRCRLDVIH WPLDRIDQSM EEDLDALGPF GMGNPAPLLY HPGGFQVEPM GRTGRVSKLL AQGREIVAFA SPLELQGMEA RGIVYRPKME AWRGRRRLKL YLEKVVLSSG EGVDR
|
| |