Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_0088 |
Symbol | |
ID | 8629898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 96109 |
End bp | 96897 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003316610 |
Protein GI | 269791706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAG GACGAACTTG GGCCGCGGGG CTCATTTGCA TGGCCCTCCT GGCGGCGGTG ATCGCCTTAG CTCCACCGGG GTTCGCGGAG GACTCAGAGG AAGGGTCCTT CCGAATAGAC GAGGTCAACC CCACCACACA ACCATCGGCT TCGAAACCGG CGGACAGCGC CGGACCCGGC GAGGAACCGA AGCTGGTGGC CATAGAGGCA AGGGACGCGG AATACCACCA ATCCATCAAG GACGCCCTCA GATCCATGGG GCTCTCACCC AAAGACCTGA CCGCCTGGCT ACTAAGACAC CCGGAATCCA TACTTCACAA GCTTGGCTCC TTCTCCGCCG ACGACCAGCG CAAGGTGGCC ACGGTGACCC GTTACATCCG GGGCACCAAC CCGAGCGTGG CCCCCATGAC GGCCCTCAGG ACCGCCGGGG CCCTGGTGTA CTACAGCGCC AAGTACGGCA TACCGGTGCA CCTGTCCACC GCGGTGGCCC ACACGGAGAG CCGGTTCGAC CCCAAGGCGG TGAGCAACAA GGGGGCCATG GGGATCATGC AGGTCATGTG GCGGGTCCAC AATGGGCTCC TGCAGGCCAA CGGCATCGCC ACCAAGGACG ACATGTTCAA CCCCGAGAAG GGGGTGGCGG CGGGGTGCCT GCTCCTGTCC CGATACATCA ACGCCTACGG GTCCATACCC AAGGCCCTGG CCCGGTACTA CGGGGGCTCC TCCACCGCCT ACTTCCGGAA GGTAAACACC AAGATGGCCA ACATCCGGTC CTCCATCTAT CCCCAGTAG
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Protein sequence | MKLGRTWAAG LICMALLAAV IALAPPGFAE DSEEGSFRID EVNPTTQPSA SKPADSAGPG EEPKLVAIEA RDAEYHQSIK DALRSMGLSP KDLTAWLLRH PESILHKLGS FSADDQRKVA TVTRYIRGTN PSVAPMTALR TAGALVYYSA KYGIPVHLST AVAHTESRFD PKAVSNKGAM GIMQVMWRVH NGLLQANGIA TKDDMFNPEK GVAAGCLLLS RYINAYGSIP KALARYYGGS STAYFRKVNT KMANIRSSIY PQ
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