| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1776 |
|---|
| Symbol | |
|---|
| ID | 6093227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1791491 |
|---|
| End bp | 1792600 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642488973 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001739790 |
|---|
| Protein GI | 170289552 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.56574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTACA GACTCATGTC GATAGAATTC TTCGTCTACG GCACGATGGC CGTTTATTCA
CTGTTGAGTC AGTTTCTGGC AAACGAAGAA CTCTCGAAGT CTCAGATAGG GATCCTGATG
GCTATCTTGC CGATCACATC ACTCTACGCG AACCATCTGA ATTTTGAAAT CGCTTCCACC
ATAGGAAGGG TGAACTGGCT GAAAAGAGTG ATTCTATTCG CTGGGATCCT TTTCTGGGGA
CTGTTTCTGT TCGATGAGTT CTACCTGAAA CTCTTATTCA TGGCTGTGTT CGCTTTTTTC
TTTTCTGCAG TGACACCACT CTCCGAGTCT GTTATCGTGG ACATCACATA TCAGATGAAG
ATGAACTACG GCAGAATCAG ATTGTTTGGA ACCTTCGGTT TCTCTTTCAC AGCTCTTTTA
ATGAGCGGAC TCATCAGACT GGGCTTTGTC ACGATATTCT GCACTTTCAC TACCCTGATG
TTTTTGACCT TCTTAATATT GAACCCAATG AAAGAAGTAG AACTCGGTGA AGAAGAAAAA
AGAAAGAGTA AGAAACCTCT TCCCACTTTC TTCTGGCTTC TTCTTCCCGT TGTGATCTTT
GGAATAGCAG CGAACAACTT CAATTTCGTT TTTCTGCCTG TTTTGATGAA GGAAAGAAAC
TACGACGTGT CTCTTGCGAG TATCGCCCTT TCTCTCATGG CCATCACAGA AACACCGTTC
CTCCTGTGGG CCGATGAGAT AGTGAAAAAG CTCGGTGTGG GATTCATGCT CGCTTCGGGT
GTTTTCGTTG TGGGTCTCAG GAACCTGCTT GTGACCATGA CAGGGTCTCC AGCTGCCTTG
CTGATGGTTC AACTCCTGCA GGGATGGACC TACATAGTGA TCTATTACTC CATGATGTTT
CTCATTCGAA CGTTCGGCTC CGCGAGGATC AGGGCACAAA AGTACTTCTG GGTCGCTATG
GGAATAGGGC CATTCATAGG CTCATCGGTA GGTGGTGTGC TCGCAGAAAA TCTTGGTCTT
ATCAATTCAT ACAGGATCCT CGGTTTGGTT CCTATGATTG TCTCTCTCTT TGTCTTTCTT
TTCCTCAGGA AGTACGAAAG AGCTTCTTGA
|
|---|
| Protein sequence | MRYRLMSIEF FVYGTMAVYS LLSQFLANEE LSKSQIGILM AILPITSLYA NHLNFEIAST
IGRVNWLKRV ILFAGILFWG LFLFDEFYLK LLFMAVFAFF FSAVTPLSES VIVDITYQMK
MNYGRIRLFG TFGFSFTALL MSGLIRLGFV TIFCTFTTLM FLTFLILNPM KEVELGEEEK
RKSKKPLPTF FWLLLPVVIF GIAANNFNFV FLPVLMKERN YDVSLASIAL SLMAITETPF
LLWADEIVKK LGVGFMLASG VFVVGLRNLL VTMTGSPAAL LMVQLLQGWT YIVIYYSMMF
LIRTFGSARI RAQKYFWVAM GIGPFIGSSV GGVLAENLGL INSYRILGLV PMIVSLFVFL
FLRKYERAS
|
|---|
| |