| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1767 |
|---|
| Symbol | hisD |
|---|
| ID | 6093218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1783807 |
|---|
| End bp | 1785093 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642488964 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001739781 |
|---|
| Protein GI | 170289543 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTAA TGAACAATCC CGGGGATAAA GAAGTGCTCA GACTATTGAA ACAAAGGATG
GAATCTGTAT CGCAGGTGGA AGAGACCGTA AAAGAAATCA TCAGGAGAGT GAAAGAAGAA
GGAGACAGAG CCCTCGAGGA ATTCCTCAAA AGGTTCGAGA AGCACCCGGT GGGCATCGAG
AACCTTCGTG TCACAGAGAA GGAAATATCG GAAGCCCAAG TAGAGGAAGA ATTCGTTGAA
ACGATAAAAA TCGTGATAGA AGACCTGAAG GAATTCCATC GAAGACAGGA GGAAAGATCT
TTCTTTTTCA CGACGAAGGG TGGAAGCTTC CTGGGAGAGA TGGTTGTTCC TCTCGAGAGT
GTGGGAATCT ACGTTCCTGG GGGAAAGGTT CCGTACTTTT CCACGCTCCT CATGTGCGCG
GTTCCCGCTA TCGTTGCTGG TGTGGAAAGG ATCGCTGTCA CAACACCACC GAATGAAAAC
GGAGGCATCT CTCCATACAT CCTGAAAACC TGCGAAATCC TCGGTCTGAA GGAGATCTAC
CGGATGGGAG GGGCTCACGC GGTAGCCGCC CTCACATACG GCACGGAAAC AGTGAAACCC
GTTGACAAGA TCGTGGGACC CGGTGGAGTC TTCGTCACGC TCGCAAAGAA ACACGTTTAC
GGAGACGTTG GAATCGATTC CATAGCGGGT CCCAGCGAGA TTGCGATCGT GACAGACGGC
AGTGCCGACC TGGATCTCAT AGCCGCGGAT TTCCTCTCCC AGGCAGAGCA CGACGAGAAC
GCGATGAGTG TGGTGATAAC CACTTCGAAA GAAGTCTTCG AAAAATTACC TCAGGTCATT
GAAAGACACC TGGAAGCTCT TCCAGAAGAG AGAAGAAAAA CGGCCAGGAT TTCAACGGAA
AATTTCGGTA CCATCATCTT GACGGACAGT CTGAAAAGGG CCTTTGAGAT CTCCAACCTC
ATCGCCCCCG AACATCTGGA GGTCCTCGTG GAAAACCCGT TTGAGCCACT GGGACACATA
AAGAACGCGG GATCTGTCTT TCTCGGAAAG TACACCTGTG AGTCTGTGGG AGACTACGGT
GCGGGACCGA ACCACGTTCT TCCCACCTTC AGATCCGCGA GGTTCTCCTC AGGACTCAGG
GTTTCCGATT TCACGAAGAA GATATTCATC ACACACCTCT CCGAAGAAGA TTTCAGAAGA
AAGAGCGAGC TTTACTCGAA GATGGCGCGC TGGGAAGGTT TTGAAGCCCA CGCTCGGGCG
ATAGACGTCA GGAGGGAAAA GCTGTGA
|
|---|
| Protein sequence | MILMNNPGDK EVLRLLKQRM ESVSQVEETV KEIIRRVKEE GDRALEEFLK RFEKHPVGIE
NLRVTEKEIS EAQVEEEFVE TIKIVIEDLK EFHRRQEERS FFFTTKGGSF LGEMVVPLES
VGIYVPGGKV PYFSTLLMCA VPAIVAGVER IAVTTPPNEN GGISPYILKT CEILGLKEIY
RMGGAHAVAA LTYGTETVKP VDKIVGPGGV FVTLAKKHVY GDVGIDSIAG PSEIAIVTDG
SADLDLIAAD FLSQAEHDEN AMSVVITTSK EVFEKLPQVI ERHLEALPEE RRKTARISTE
NFGTIILTDS LKRAFEISNL IAPEHLEVLV ENPFEPLGHI KNAGSVFLGK YTCESVGDYG
AGPNHVLPTF RSARFSSGLR VSDFTKKIFI THLSEEDFRR KSELYSKMAR WEGFEAHARA
IDVRREKL
|
|---|
| |