Gene TRQ2_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1716 
Symbol 
ID6093167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1733509 
End bp1734609 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content48% 
IMG OID642488916 
ProductABC-2 type transporter 
Protein accessionYP_001739733 
Protein GI170289495 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGAA TAGCCATTGT GGAACTGAAG AGGATCTTGA AGAAAAGATC TTCACTGATG 
ATGATAATCG CTGCACCCGT TCTGGTTGTG CTGATCTCTC TTCTCTTCAT GCAGGGGTAC
AACCTTCAGA CGATGAAGCT CGGAATATAC AACGAAGACA ACAGCATCTG GTCCTCCCTC
GTCATGAGAT TCATTGGAAC CATCCTGAGA CAGGAAAACA TAGTGAAAGT CGATCAGAAC
TACGAAAAAC TTCTGAAGAA AGGAAAGCTG AACGCGGTCA TAGTGATTCC AAAGGGCTTC
GCGGCGAAAC TGTATTCCAA ACAGCCAACC CAGATGATCT TCATCCCGAG TCCCATCGAT
CTTCACCTCG CCGCCGCGAT ATACAACGTT CTCGATTCCG TTCTGGCAGA TTTCCAGGGA
AGTGCCTTCT TCGATCCCAA GGTGCTCCGG TACATATTCA CAGAGTCCGA TTATCCCGTA
CCCAGATTGA CATTGAAAGA CTCAGAACTC AGATTTTCTG ATCTCATCTC CCCCTTCATC
GTCTTTTTCA CGGCGATTTT GATAACCGTA TCACTGGCGA GTGTCTCCAC CTTTCTCGAC
AGAGAGAAAA ACCTGCACGA GATGTTCCTC GTGTACAACC TTCCGGCACG GAAATACGCC
TGCGGGAAGA TACTTGCTTA CACCGTCATT GGAGCTTCCG TTTCTTTCAT AGCCTACGCC
CTGACGGTGA TACTGACTGG AGACAACCTG GGCTTCTTCG TTACGTCTGT TCTCATCCTT
CTCAACGCTC TTCTTCACAC GTCCGTGGGT TTTCTGGTTT CTTCCATTTC TCCCGACAAG
AGTCTTGCAA ACATACTCGG TGTTTCTGTT ATAGGAATAT CCCTGTTCTC AAGCGGTTTT
GCCATTCCTA TAAGCAATTT GCCAGATATC CTCCGAAGAA TCGCCATGTC GACGCCCGTG
TTCAGAACCA TGTACGCCCT CAGGGTATAC CAGCTGGAGC ACACAATCGA TAATCGCTCG
ATCTTTGTCG TCTCGCTCTG GACAGTTGTT TTGTTCTCCA TTTCTGTTCT ATCGGGAAAG
TTCGTTATCA GGAGGGGTTG A
 
Protein sequence
MFRIAIVELK RILKKRSSLM MIIAAPVLVV LISLLFMQGY NLQTMKLGIY NEDNSIWSSL 
VMRFIGTILR QENIVKVDQN YEKLLKKGKL NAVIVIPKGF AAKLYSKQPT QMIFIPSPID
LHLAAAIYNV LDSVLADFQG SAFFDPKVLR YIFTESDYPV PRLTLKDSEL RFSDLISPFI
VFFTAILITV SLASVSTFLD REKNLHEMFL VYNLPARKYA CGKILAYTVI GASVSFIAYA
LTVILTGDNL GFFVTSVLIL LNALLHTSVG FLVSSISPDK SLANILGVSV IGISLFSSGF
AIPISNLPDI LRRIAMSTPV FRTMYALRVY QLEHTIDNRS IFVVSLWTVV LFSISVLSGK
FVIRRG