Gene TRQ2_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1479 
Symbol 
ID6092925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1486152 
End bp1486925 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content46% 
IMG OID642488685 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_001739506 
Protein GI170289268 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCC AGAAACACGG AGAAGACTGG AAAGGTACAG TTGTGATCGT ACACGGTCTC 
GGTGAACACT CCGGGAGGTA CAGAAGACTT GTGAGAGAAT TCGTTTCAGA GGGTGTTCAG
GTGGTCACAT TCGATCTACC AGGTCACGGC AAATCTCCCG GAAGAAGAGG GCACCTTCGT
TTTGATGACG TTTTTAAAAT ATTGAACGAG ATCACGAAAG ATCTGGAAAG GTTCGTGCTC
TTTGGTCACA GTCTCGGTGG ATTGATAGCT ATCAGATTCA CTCAGATTTT TCAGCCAGAG
AACCAGAAAG GGTTGGTGGT GTCGGCCCCC GCTATCCTGC TTCCAGATAC CCATTCTCCG
GTCCTTGAAT TCATGGTGAG GTTTCTGTCC GTTTTTGTTC CATTCCTCAC GATGAGCAAC
GGAATAAATC CAAGCGATCT TTCCAGGAAC AGAGAAGCGG TGGAAGCGTA CATAAGAGAT
CCCCTCGTTC ACGACAGGAT CTCTTTCAAG CTCGCTTCAG ATATGCTCTC CCATATGAAA
AAGGTTCTCA AAGACGCTGA AAGGATAAAG GTTCCTGTTC TCATTCTTCA CGGAACTGAT
GACAGGGTGG TGTCTTTTGA GGGAAGCAAG AAGTTTTTCG AAGCACTGAG CACAGAGAAA
AAACTGGTGA GCTTTCCTGG AGGATACCAT GAACTTTTTG AAGATCCAGA GCACCAGAAA
GAGTTTTTCA AAACGATAGT CGAGTGGAGT CTCGAAAAAC TCGGAGGGAA ATAA
 
Protein sequence
MNIQKHGEDW KGTVVIVHGL GEHSGRYRRL VREFVSEGVQ VVTFDLPGHG KSPGRRGHLR 
FDDVFKILNE ITKDLERFVL FGHSLGGLIA IRFTQIFQPE NQKGLVVSAP AILLPDTHSP
VLEFMVRFLS VFVPFLTMSN GINPSDLSRN REAVEAYIRD PLVHDRISFK LASDMLSHMK
KVLKDAERIK VPVLILHGTD DRVVSFEGSK KFFEALSTEK KLVSFPGGYH ELFEDPEHQK
EFFKTIVEWS LEKLGGK