Gene TRQ2_1466 details

Gene Information

• Locus tag: TRQ2_1466
• Symbol: prfA
• ID: 6092912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 1472591
• End bp: 1473619
• Gene Length: 1029 bp
• Protein Length: 342 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642488672
• Product: peptide chain release factor 1
• Protein accession: YP_001739493
• Protein GI: 170289255
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1; [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGAAA AGAAAAAAGA GATCGAAAAG CTCCTCGCCA GGCCAGATCT GACTCCCGAA 
CAGATGAAGA ACTACGGGAT AGAATACGCA AAGATAGAAG AAATAGAGAA CATCGCAAAC 
AGAATAAAAG AAACTCAGGA GTTCATCGAA CTCTTGAGAG AAGAAGGAGA AAATGAACTG 
GAGATAGAAA AGTACGAGAA AGAACTCGAT CAGCTCTATC AAGAACTTCT CTTGCTTCTT 
TCTTCAGAAG TGGGTGATAA AGCAATCGTA GAAATCAGAC CCGGCGCAGG TGGAGAAGAA 
GCCGCTCTCT TCGCACGGGA TCTGTTCAGA ATGTACACCA GGTACGCAGA AAGAAAAGGC 
TGGAACCTCG AAGTCGCTGA AATCCACGAA ACAGATCTCG GTGGAATAAG GGAAGTGGTC 
TTCTTCGTAA AAGGAAAGAA CGCTTACGGT ATACTGAAGT ACGAAAGCGG TGTTCATCGA 
GTACAGAGAA TTCCTGTCAC GGAGTCTGGA GGGAGGATCC ATACGTCCAC CGCTACCGTT 
GCCGTTCTTC CAGAGATTGA AGAAAAGGAT ATAGAAATCA GGCCGGAAGA CTTGAAGATA 
GAAACTTTCA GGGCATCGGG ACACGGTGGA CAGTACGTCA ACAAGACCGA ATCCGCTGTA 
AGGATCACAC ATATTCCAAC GGGAATAGTG GTGTCGTGTC AGAACGAAAG ATCTCAGTAT 
CAGAACAGGC AAACCGCTTT GAGGATCCTC AGGGCAAGAC TCTATCAGTT ACAGAAAGAA 
CAAAAAGAAA GGGAAATCTC ACAGAAGAGA AAATCGCAGA TAGGAACCGG TGAGAGAAGT 
GAAAAAATCA GAACTTACAA CTTCCCCCAG AACAGAGTTA CGGATCACAG AATAAACTAC 
ACCTCTTACA GACTGCAGGA GATCCTCGAT GGAGACCTGG ACGAAATCAT ATCGAAGCTC 
ATAGAACACG ACATAGAAAA CAACCTCGAG GAAGTTTTAG GAATCGGAGC CTCAGTCGAA 
GAAAAGTAA 

 

Protein sequence

MKEKKKEIEK LLARPDLTPE QMKNYGIEYA KIEEIENIAN RIKETQEFIE LLREEGENEL 
EIEKYEKELD QLYQELLLLL SSEVGDKAIV EIRPGAGGEE AALFARDLFR MYTRYAERKG 
WNLEVAEIHE TDLGGIREVV FFVKGKNAYG ILKYESGVHR VQRIPVTESG GRIHTSTATV 
AVLPEIEEKD IEIRPEDLKI ETFRASGHGG QYVNKTESAV RITHIPTGIV VSCQNERSQY 
QNRQTALRIL RARLYQLQKE QKEREISQKR KSQIGTGERS EKIRTYNFPQ NRVTDHRINY 
TSYRLQEILD GDLDEIISKL IEHDIENNLE EVLGIGASVE EK