| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1224 |
|---|
| Symbol | tgt |
|---|
| ID | 6092660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1255746 |
|---|
| End bp | 1256855 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642488420 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_001739251 |
|---|
| Protein GI | 170289013 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.736515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTCG AAGTGAAAAA AACTTTCGGA AAAGCAAGAC TGGGTGTCAT GAAGCTTCAC
CACGGAGCTG TTGAAACTCC TGTTTTCATG CCGGTTGGAA CCAACGCAAA CGTGAAGCTT
CTCACTCCCA GAGATCTGGA AGAAGCAGGA GCGGAGATAA TTCTTTCGAA CACGTTTCAT
CTCATGTTGA AACCCGGTGT GGAGATCATA AAGCTTCACA GGGGACTTCA CAACTTCATG
GGATGGAAAA GACCGATACT CACCGACAGC GGAGGTTTTC AAGTTTTCAG CCTTCCAAAG
ATCAGGATAG ACGATGAAGG TGTGGTCTTC AGATCTCCTA TTGACGGTTC GAAAGTTTTC
CTGAATCCAG AGATATCCAT GGAGGTTCAG ATCGCTCTGG GATCGGATAT CTGCATGGTC
TTCGATCACT GTCCTGTACC CGATGCCGAT TACGAAGAGG TGAAAGAGGC AACAGAGAGA
ACCTATCGAT GGGCTCTGAG ATCTAAAAAG GCTTTCAAAA CGGAGAATCA AGCACTCTTT
GGAATCGTTC AGGGAGGGAT CTACCCGGAT CTGCGGAGAG AAAGCGCTCT TCAGCTTACA
TCGATTGGAT TCGATGGATA CGCCATAGGA GGATTGAGCA TAGGTGAAGA AAGATCCCTC
ACTCTTGAAA TGACCGAAGT CACGGTGGAG TTTCTTCCGG AAGATAAACC CCGTTACTTC
ATGGGAGGAG GGTCTCCAGA ACTCATACTC GAGCTCGTTG ATCGAGGAGT GGATATGTTC
GACAGCGTCT TCCCAACCAG GATAGCAAGG CACGGAACTG CGCTCACCTG GAATGGGAAA
CTCAACCTCA AGGCCTCTTA CAACAAGCGG TCCCTCGAAC CGGTGGACGA AAGGTGCGGG
TGTTATACCT GCAAGAATTT CACGCGGTCT TACATCCATC ACCTCTTCGA TCGAGGAGAA
GTCCTTGGGC AGATACTCCT CACGATTCAC AACATCAACT TCATGATCTC TCTAATGAAG
GAAGTAAGGC GTTCTATAGA GAGTGGAACC TTCAAGGAAC TGAAAAGCAA AGTGGTAGAA
GTCTATTCTT CAGGGGGTGT GAATGTATGA
|
|---|
| Protein sequence | MEFEVKKTFG KARLGVMKLH HGAVETPVFM PVGTNANVKL LTPRDLEEAG AEIILSNTFH
LMLKPGVEII KLHRGLHNFM GWKRPILTDS GGFQVFSLPK IRIDDEGVVF RSPIDGSKVF
LNPEISMEVQ IALGSDICMV FDHCPVPDAD YEEVKEATER TYRWALRSKK AFKTENQALF
GIVQGGIYPD LRRESALQLT SIGFDGYAIG GLSIGEERSL TLEMTEVTVE FLPEDKPRYF
MGGGSPELIL ELVDRGVDMF DSVFPTRIAR HGTALTWNGK LNLKASYNKR SLEPVDERCG
CYTCKNFTRS YIHHLFDRGE VLGQILLTIH NINFMISLMK EVRRSIESGT FKELKSKVVE
VYSSGGVNV
|
|---|
| |