Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1166 |
Symbol | |
ID | 6092601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1204317 |
End bp | 1205096 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642488361 |
Product | ABC transporter related |
Protein accession | YP_001739193 |
Protein GI | 170288955 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00292656 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAA CGCTGAATAG CGTTTCCTTC AGATACAACG GAGACTACGT TTTGAAGGAC GTGAACGCCG AGTTCGAAAC GGGGAAGATC TACGTTGTGG TGGGAAAAAA CGGCTCCGGG AAGACCACCC TTTTGAAGAT CCTCGCAGGA CTCCTGGAAG CCGAGGGAGA GATTTTCCTG GACGGTTCAC CAGCGGATCC GTTTCTTTTG AGAAAGAACG TGGGCTACGT CTTCCAGAAT CCGTCTTCAC AGATCATAGG TGCCACCGTG GAGGAGGACG TGGCCTTTTC GCTGGAGATA CTGGGGCTCG ACGAGGGCGA AATGAGAAAG AGAATAAAGA AGGTCCTGGA ACTGGTGGGA CTCTCCGGTC TCGAAAAGGA AGACCCGCTG AGCCTTTCAG GAGGACAGAA ACAGAGACTT GCAATCGCCT CGATGCTCGC TCGAGACACA CACTTTCTCG CTTTAGATGA GCCGGTTTCC ATGCTGGACC CTCCCTCTCA GAGGGAGATA TTTCAGGTGC TCGAGAGCCT CAAGAATGAA GGAAAGGGAA TAATACTGGT AACACACGAG CTGGAGTATC TGGATGATAT GGACTTCATA CTCCACATCT CGAATGGTAC AATCGATTTC TGTGGAAGCT GGGAGGAATT CGTGGAGAGA GAGTTCGACG ATGTGGAGAT TCCTTTCAAG TGGAAACTCT GGAAGAAATG TGGGAAGATA AACCTGTGGG AGGATCGGTA TGAGAATTCT GGTAACCAAC GACGACGGGA TACAGTCTAA
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Protein sequence | MKITLNSVSF RYNGDYVLKD VNAEFETGKI YVVVGKNGSG KTTLLKILAG LLEAEGEIFL DGSPADPFLL RKNVGYVFQN PSSQIIGATV EEDVAFSLEI LGLDEGEMRK RIKKVLELVG LSGLEKEDPL SLSGGQKQRL AIASMLARDT HFLALDEPVS MLDPPSQREI FQVLESLKNE GKGIILVTHE LEYLDDMDFI LHISNGTIDF CGSWEEFVER EFDDVEIPFK WKLWKKCGKI NLWEDRYENS GNQRRRDTV
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