Gene TRQ2_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1116 
Symbol 
ID6092549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand- 
Start bp1160278 
End bp1160940 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID642488311 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001739145 
Protein GI170288907 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAA TAGCAGCTTC AATTCTCGCA TGTGACCTTG CAAGACTGGC CGATGAAGTG 
AAAAGAGTGG AGGAGCACGT GGATATGATC CATTTCGATG TCATGGATGG TCACTTTGTT 
CCAAACATTT CCTTTGGACT TCCCGTTCTG AAAGCCCTCA GGAAAGAAAC AAAACTTCCC 
ATAAGTGTAC ATCTGATGAT CACCAATCCC GAAGATTACA TCGACCGCTT CATAGAAGAA 
GGCGCAGATA TGGTTGCCAT CCATTACGAA TCGACCTTTC ATCTCCACAG GTTGGTCCAT 
CGTGTTAAAG ACCTTGGAGC ACAGGCCTTT GTTGCCATAA ATCCGCATAC CCCCATCAAT 
CTTCTTTCAG AGATCATAAC CGACGTCGAT GGTGTACTGG TGATGAGCGT CAATCCCGGT 
TTCTCTGGTC AGAGGTTCAT AGCAAGGAGT CTTGAGAAAA TAAGAAACCT GAGAAAGATG 
GTGAAAGAAC TGGGACTGGA AACGGAAATC ATGGTCGACG GCGGTGTAAA CGAAGAGAAC 
GCATCGATAC TGGTTAAAAA CGGTGCGACG ATCCTTGTGA TGGGATACGG TATCTTCAGA 
AACGACAATT ACGTTGAACT GATAAAGAGC ATCAAACAGG AAAGAGAGGA ATCTGCTGAC 
TGA
 
Protein sequence
MAKIAASILA CDLARLADEV KRVEEHVDMI HFDVMDGHFV PNISFGLPVL KALRKETKLP 
ISVHLMITNP EDYIDRFIEE GADMVAIHYE STFHLHRLVH RVKDLGAQAF VAINPHTPIN 
LLSEIITDVD GVLVMSVNPG FSGQRFIARS LEKIRNLRKM VKELGLETEI MVDGGVNEEN 
ASILVKNGAT ILVMGYGIFR NDNYVELIKS IKQEREESAD