| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0991 |
|---|
| Symbol | |
|---|
| ID | 6092421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1036847 |
|---|
| End bp | 1038055 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642488187 |
|---|
| Product | IS605 family transposase OrfB |
|---|
| Protein accession | YP_001739024 |
|---|
| Protein GI | 170288786 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGAC GTGTGATACG AACCTACAAA CTCGCTGTAC CAGGACATTT GAATCAAATA
TGCGAAGAAC TCAACCGCAC AGCAGCAAGA ATCTACAACA AAACGATGTC TCTTGTGCGA
AAGATACACC AAAAGAAAGG CTTCTGGCTG TCCTGGCCTG CCGCAGACAA ATACATCCTC
CGCTGGGCAG AAAACATCAA AATCCACGTC CACTCAAAGC AGGCATTTGT TCAGCTCTAC
TTTCAAGCCC TCAAAGGGTA CTTCAAAGCA ACCAAAAAGA ATCCAGATGC AAAACCTCCC
CACAAGAAAA AACGCTATCT GCCGTTCATA TGGAAAGAAA GCGCTGTAAA ACTTCTGCCA
GACGGCACCC TGAGATTGTC TTTGGGCAAA GAACGAGAAC CATTTGTTGT ACAAACACCT
CTCAAACCTC CCCTTCGCAT CAAACAGACA AGACTTGTCT TTGAAGATGG ATACTATCTC
CACCTTGCGA TAGAGGTGGA GATTGAAGAG AAGAATGCTG GCTCTGGTGT TATGGCGGTC
GACCTTGGAG TGCTCCGTCC CATTACGTGC TTTGATGGAA AAGAAGTCAT CAGCTACCAC
GGAGGAGTCC TCAGCAGTGT TCTTCGCTAT CGAAACAAAC GCCTTGCAAG TTTTCAGTCT
GCCATAGCAG AGTGCAAGAA GGGATCAAGA AGGTACAACA AGCTTGTTAG TGCAAAGAAA
AGAGCCCTGA GACGGCTCAG AAACCAGATC AACGACATCA TGCACAAGAT CACAAGCAGT
TTCATCGGAC TGTGCCTCAG AAAACAAATC AGAACCATCG TGATAGGAGA CGTCACAGGG
ATCAGAGAAA GAGCAGACTA CAGCGACAAC GCGAACCAGA AGATCCACCA GTGGCAGTTC
AGAAAACTCA TCGAGATGAT AAGGTACAAA GCAGAGCAGT TCGGAATCGA AGTGGAACTC
ATTTCAGAAG CGAACACGAG CAAGACGTGC CCTGTCTGTG GTGCAAAGAA CAAGCCGAAT
GGAAGAAGAT ACCACTGCAA AGCCTGTGGT TTTGAGTATC ACAGGGACGG AGTTGGAGCA
ATCAACATCT GGAAAAGGTA TCCTGGCACA GGCCAGGTAG TAGCGGGCTT GGCCCCCGCC
AGAGGTGTGA GGTTTCATCC ACACCTCTGT GGCCATGGAG CATCTTTGGC TCCATGGAAG
GTGGCCTGA
|
|---|
| Protein sequence | MSRRVIRTYK LAVPGHLNQI CEELNRTAAR IYNKTMSLVR KIHQKKGFWL SWPAADKYIL
RWAENIKIHV HSKQAFVQLY FQALKGYFKA TKKNPDAKPP HKKKRYLPFI WKESAVKLLP
DGTLRLSLGK EREPFVVQTP LKPPLRIKQT RLVFEDGYYL HLAIEVEIEE KNAGSGVMAV
DLGVLRPITC FDGKEVISYH GGVLSSVLRY RNKRLASFQS AIAECKKGSR RYNKLVSAKK
RALRRLRNQI NDIMHKITSS FIGLCLRKQI RTIVIGDVTG IRERADYSDN ANQKIHQWQF
RKLIEMIRYK AEQFGIEVEL ISEANTSKTC PVCGAKNKPN GRRYHCKACG FEYHRDGVGA
INIWKRYPGT GQVVAGLAPA RGVRFHPHLC GHGASLAPWK VA
|
|---|
| |