Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0977 |
Symbol | |
ID | 6092407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1015714 |
End bp | 1017456 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642488173 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_001739010 |
Protein GI | 170288772 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.121052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT CACTGATACT GATTTTGATC ATCATTTCAA TCCTGACTTT CTCTCAAACA TTCAAACTCG AGAAGGTGCT GGGATTCAGC GATATTTCAG CTTTAACATT CAAAGATGGT TATCTCCTAC TTGGAACGGG AAACGGTGAA ATCATCGTCT ACAAAGACGG ATCCTATTAC AGAGCTTTCA AAGTCCACGA CAACAGAGTA AACGAAGTGA TCTTTGAGAA CGGGTTTATC GTGAGCGCTT CGGACGACAA AACAGTTGGT GTGACGAATC TGGAGACGGG TGAAACACAT CTCCTCAAAG GTCACATAAA AGGTGTTTCT TCCGTCGCTG TAGCAGGCAG TAAAATCCTA AGCGCCTCTT TCGATGGAAC GGTGAGAATA TGGTCTTTCC CGGATGGAGA GGAAATCTCT TCTCAAAAGC TTGGACCATC GGTTGTTCAA ATCGCCGCTT ATGAGAACAG ATACGTCGTG GGACTGGCCA ACGGACTTGC TGTGATCAGG GATCTCTCGA ATCAATCATT TTCCATTCCC CTCAAGGCCC ATCCTGAAGG AATTAAAAAG ATCGTGTTCT CAGAGAATGG ACAGTTGATC GCAACCTGTG GGGGAAACAC CGTAAAGGTA TGGAACGCCT CGAATGGAAA TCTCGTCCTC CAGTACGACC ACGCTATAAC GGTGAACGAT TTGGCTTTTC TTGACAATGA TGATCTCATT TTTGTAGCCG ACGACTACAA AGCTGTGGTT TTGAACATTC AGAAAAACGA AGTGGTGAAA TCAATCGACG CTCATAACAA CTTCGTTCTT TTCGTCTCTT CAGATGACGG TAGCATAGCA ACCTACGGAA TGGACAAAAC TGTCAAAGTG TGGAATGCCG ATCTGGAGCT TCAGTACTCT CTCTACGGTC ACCAACTCTC GGTGAACACA GTAGCTTTAT CAAGCGACGG GAAATTCATC GTGAGCGGCA GTGACGATAG AGAAATTCTG ATATGGAACG CTGAGAAGGG GATCGCTGAA CACAGGATAA AGGCTCTATC AGGGGTCAGA AAGCTTTTGA CAGTAGAAAA CAACATCATT TCCTGTCTTG ATAGCAATCA ACTCAAGATT TATAACCTGG AAAATGGAAA GCTCGTGAAG AGAATCAAAG TTGGCACGAC GAGCACAATG GACATCGCTC TTCAAAACGA TAGAATGGCA ATAGGATTCT ACGACGGAAG TGTCGCTCTG TTCAGATATC CAACCTTCGA AGAGATATGG AGAAAAGACA CAGAACACGA AATGATCCAA ACGATTGATA TGAACAACAA ATTCATCGCC TTCGGAGTTT CTTACTCTGA TCCAAAAGAC AAGATAGGTT ACGTAGAAGT TCTCTCCGCA GACACAGGGG AAAGAGTACT TCTGCTGGAA GGTCACAGAG GAAACGTAAA CGCTGTGAAA TTCGCTGGGG ACTTTCTTGT CTCAGGTGGA GAAGACGGAA AGGTCATTCT CTGGAGCTTG GATACAGGTT CAAAAGTCCG CGAGATCTAC CTGAACGAAC CAGTGTCCTC TCTATTAATC GATGAAAAGG AACTCTTTGT TGGAACCTGG AATGGAAATA TCAAAATTTT TGCTTTTCCA GATCTGACCT TGAAGACTTC TTTGAAAGCC TCTGATCAAA AGATAGGACA TTTCATAAAG GTGGGCGATC AGCTCGTAGT TCCATGCGGT GATGGAAAGA TAAGGATCCT CTTGGAAAAG TGA
|
Protein sequence | MKKSLILILI IISILTFSQT FKLEKVLGFS DISALTFKDG YLLLGTGNGE IIVYKDGSYY RAFKVHDNRV NEVIFENGFI VSASDDKTVG VTNLETGETH LLKGHIKGVS SVAVAGSKIL SASFDGTVRI WSFPDGEEIS SQKLGPSVVQ IAAYENRYVV GLANGLAVIR DLSNQSFSIP LKAHPEGIKK IVFSENGQLI ATCGGNTVKV WNASNGNLVL QYDHAITVND LAFLDNDDLI FVADDYKAVV LNIQKNEVVK SIDAHNNFVL FVSSDDGSIA TYGMDKTVKV WNADLELQYS LYGHQLSVNT VALSSDGKFI VSGSDDREIL IWNAEKGIAE HRIKALSGVR KLLTVENNII SCLDSNQLKI YNLENGKLVK RIKVGTTSTM DIALQNDRMA IGFYDGSVAL FRYPTFEEIW RKDTEHEMIQ TIDMNNKFIA FGVSYSDPKD KIGYVEVLSA DTGERVLLLE GHRGNVNAVK FAGDFLVSGG EDGKVILWSL DTGSKVREIY LNEPVSSLLI DEKELFVGTW NGNIKIFAFP DLTLKTSLKA SDQKIGHFIK VGDQLVVPCG DGKIRILLEK
|
| |