Gene TRQ2_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0977 
Symbol 
ID6092407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1015714 
End bp1017456 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content44% 
IMG OID642488173 
ProductWD-40 repeat-containing protein 
Protein accessionYP_001739010 
Protein GI170288772 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CACTGATACT GATTTTGATC ATCATTTCAA TCCTGACTTT CTCTCAAACA 
TTCAAACTCG AGAAGGTGCT GGGATTCAGC GATATTTCAG CTTTAACATT CAAAGATGGT
TATCTCCTAC TTGGAACGGG AAACGGTGAA ATCATCGTCT ACAAAGACGG ATCCTATTAC
AGAGCTTTCA AAGTCCACGA CAACAGAGTA AACGAAGTGA TCTTTGAGAA CGGGTTTATC
GTGAGCGCTT CGGACGACAA AACAGTTGGT GTGACGAATC TGGAGACGGG TGAAACACAT
CTCCTCAAAG GTCACATAAA AGGTGTTTCT TCCGTCGCTG TAGCAGGCAG TAAAATCCTA
AGCGCCTCTT TCGATGGAAC GGTGAGAATA TGGTCTTTCC CGGATGGAGA GGAAATCTCT
TCTCAAAAGC TTGGACCATC GGTTGTTCAA ATCGCCGCTT ATGAGAACAG ATACGTCGTG
GGACTGGCCA ACGGACTTGC TGTGATCAGG GATCTCTCGA ATCAATCATT TTCCATTCCC
CTCAAGGCCC ATCCTGAAGG AATTAAAAAG ATCGTGTTCT CAGAGAATGG ACAGTTGATC
GCAACCTGTG GGGGAAACAC CGTAAAGGTA TGGAACGCCT CGAATGGAAA TCTCGTCCTC
CAGTACGACC ACGCTATAAC GGTGAACGAT TTGGCTTTTC TTGACAATGA TGATCTCATT
TTTGTAGCCG ACGACTACAA AGCTGTGGTT TTGAACATTC AGAAAAACGA AGTGGTGAAA
TCAATCGACG CTCATAACAA CTTCGTTCTT TTCGTCTCTT CAGATGACGG TAGCATAGCA
ACCTACGGAA TGGACAAAAC TGTCAAAGTG TGGAATGCCG ATCTGGAGCT TCAGTACTCT
CTCTACGGTC ACCAACTCTC GGTGAACACA GTAGCTTTAT CAAGCGACGG GAAATTCATC
GTGAGCGGCA GTGACGATAG AGAAATTCTG ATATGGAACG CTGAGAAGGG GATCGCTGAA
CACAGGATAA AGGCTCTATC AGGGGTCAGA AAGCTTTTGA CAGTAGAAAA CAACATCATT
TCCTGTCTTG ATAGCAATCA ACTCAAGATT TATAACCTGG AAAATGGAAA GCTCGTGAAG
AGAATCAAAG TTGGCACGAC GAGCACAATG GACATCGCTC TTCAAAACGA TAGAATGGCA
ATAGGATTCT ACGACGGAAG TGTCGCTCTG TTCAGATATC CAACCTTCGA AGAGATATGG
AGAAAAGACA CAGAACACGA AATGATCCAA ACGATTGATA TGAACAACAA ATTCATCGCC
TTCGGAGTTT CTTACTCTGA TCCAAAAGAC AAGATAGGTT ACGTAGAAGT TCTCTCCGCA
GACACAGGGG AAAGAGTACT TCTGCTGGAA GGTCACAGAG GAAACGTAAA CGCTGTGAAA
TTCGCTGGGG ACTTTCTTGT CTCAGGTGGA GAAGACGGAA AGGTCATTCT CTGGAGCTTG
GATACAGGTT CAAAAGTCCG CGAGATCTAC CTGAACGAAC CAGTGTCCTC TCTATTAATC
GATGAAAAGG AACTCTTTGT TGGAACCTGG AATGGAAATA TCAAAATTTT TGCTTTTCCA
GATCTGACCT TGAAGACTTC TTTGAAAGCC TCTGATCAAA AGATAGGACA TTTCATAAAG
GTGGGCGATC AGCTCGTAGT TCCATGCGGT GATGGAAAGA TAAGGATCCT CTTGGAAAAG
TGA
 
Protein sequence
MKKSLILILI IISILTFSQT FKLEKVLGFS DISALTFKDG YLLLGTGNGE IIVYKDGSYY 
RAFKVHDNRV NEVIFENGFI VSASDDKTVG VTNLETGETH LLKGHIKGVS SVAVAGSKIL
SASFDGTVRI WSFPDGEEIS SQKLGPSVVQ IAAYENRYVV GLANGLAVIR DLSNQSFSIP
LKAHPEGIKK IVFSENGQLI ATCGGNTVKV WNASNGNLVL QYDHAITVND LAFLDNDDLI
FVADDYKAVV LNIQKNEVVK SIDAHNNFVL FVSSDDGSIA TYGMDKTVKV WNADLELQYS
LYGHQLSVNT VALSSDGKFI VSGSDDREIL IWNAEKGIAE HRIKALSGVR KLLTVENNII
SCLDSNQLKI YNLENGKLVK RIKVGTTSTM DIALQNDRMA IGFYDGSVAL FRYPTFEEIW
RKDTEHEMIQ TIDMNNKFIA FGVSYSDPKD KIGYVEVLSA DTGERVLLLE GHRGNVNAVK
FAGDFLVSGG EDGKVILWSL DTGSKVREIY LNEPVSSLLI DEKELFVGTW NGNIKIFAFP
DLTLKTSLKA SDQKIGHFIK VGDQLVVPCG DGKIRILLEK