Gene TRQ2_0960 details

Gene Information

• Locus tag: TRQ2_0960
• Symbol: recA
• ID: 6092390
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 994321
• End bp: 995391
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642488157
• Product: recombinase A
• Protein accession: YP_001738994
• Protein GI: 170288756
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02012] protein RecA

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00998532
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGAGG AAAAACAGAA AAAGAGTGTC CTGGAGAAAG CGTTGAAGAG AATAGAAGAA 
AACTTTGGAA AGGGTTCCAT AATGATCCTG GGTGATGAAA CCCAGGTTCA GCCTGTAGAG 
GTGATACCAA CAGGGTCCCT CGCCATCGAT ATCGCAACGG GTGTTGGAGG ATATCCAAGA 
GGAAGGATCG TGGAAATCTT TGGTCAGGAA TCGAGTGGAA AAACTACCCT TGCACTCCAC 
GCCATAGCAG AGGCCCAGAA GATGGGAGGA GTGGCTGCTT TCATAGACGC AGAGCACGCA 
CTGGATCCTG TTTACGCGAA AAACCTTGGA GTGGATCTGA AAAGTCTTCT CATCTCTCAG 
CCTGATCATG GGGAGCAAGC ACTCGAAATA GTGGATGAAC TCGTAAGAAG TGGTGTGGTT 
GACCTCATAG TTGTTGATTC CGTTGCGGCT CTCGTTCCCA GAGCGGAAAT AGAAGGTGCC 
ATGGGAGACA TGCAGGTGGG TCTTCAGGCA CGTCTCATGT CGCAGGCACT GAGAAAGATC 
GCGGGAAGTG TGAACAAATC AAAGGCGGTA GTGATATTCA CGAACCAGAT CAGAATGAAG 
ATAGGTGTTA TGTTTGGGAG CCCGGAAACC ACAACCGGTG GACTCGCCTT GAAATTCTAC 
GCAACCATGA GGATGGAAGT CAGGAGGGGT GAGCCCATAA AGGAAGGAAA AGACGTGATA 
GGAAACGTGA TAAACGTGAA GATCGTGAAG AACAAGGTTG CTCCTCCGTT CAAAACCGCA 
CAGACGTACA TCATATACGG AAAAGGAATC GATAGAGAGT ACGAGCTGTT CAATATCGCT 
GTAAATGAAG GGATAGTAGA CAGAAAAGGT AGCTGGTATT ACTACACCAC TCTCAAAGGT 
GAGGAAGTTT CTCTTGGGCA GGGAAGCTCG AACGCCGTTC AGTTTCTCAA AGACAACCCT 
GAAATAGCAG GAGAGATCGA AAGGAGAATA AGAGAAAAAT ATGGATTACT ATCAGTGGAG 
AAAGAAGAAC AGAGGAAAGA AAAGAAATCT TCAGGCGAAG AAGCCTCTTA A 

 

Protein sequence

MPEEKQKKSV LEKALKRIEE NFGKGSIMIL GDETQVQPVE VIPTGSLAID IATGVGGYPR 
GRIVEIFGQE SSGKTTLALH AIAEAQKMGG VAAFIDAEHA LDPVYAKNLG VDLKSLLISQ 
PDHGEQALEI VDELVRSGVV DLIVVDSVAA LVPRAEIEGA MGDMQVGLQA RLMSQALRKI 
AGSVNKSKAV VIFTNQIRMK IGVMFGSPET TTGGLALKFY ATMRMEVRRG EPIKEGKDVI 
GNVINVKIVK NKVAPPFKTA QTYIIYGKGI DREYELFNIA VNEGIVDRKG SWYYYTTLKG 
EEVSLGQGSS NAVQFLKDNP EIAGEIERRI REKYGLLSVE KEEQRKEKKS SGEEAS