Gene TRQ2_0830 details

Gene Information

• Locus tag: TRQ2_0830
• ID: 6092260
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 853505
• End bp: 854233
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642488028
• Product: radical SAM domain-containing protein
• Protein accession: YP_001738865
• Protein GI: 170288627
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1533] DNA repair photolyase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGTAA AAGAGATAAA TGTTAAGAGC GCACTGACTT ATTCCGAATC GAAAAGAAGG 
TACACTCTCA GCCCTTACGT GGGCTGTACC AATGCCTGTG TGTACTGTTA CGCCAGTGAT 
TACGCACGGC GATACAGAGA GATGAACTGG AAGTCAGAAA TCATCGTGAA ACGAAACATA 
GCCGAAGTTC TCAGAAAAGA TATCATCAAG AAGAAACCAC ACCACGTTTT CATGAGCACC 
ATGTGTGATC CGTATCAACC TATCGAGAAA GAGTACAAGC TCACTCGAAG ATGTCTCGAA 
GTCTTTCTGG AGTTCCCGCT TCTGGAAATC GAGGTGATGA TTCTCACAAA ATCCACACTC 
GTTTTAAGGG ACCTGGACCT GTTTAAGAAG ATGAGAAGAA TCTCGGTTGG ACTCAGCGTC 
ACAACTGATG ACGACGAAAT CCGGAAGATG TTCGAGCCCA ACGCGAGTTC CATAGAGGAG 
AGAGTGGAGG TTTTGAAGGT GCTGAAAGAA AATGGAATAA GGACCTGTGT TTTCATCAGT 
CCCATGCTTC CCATGAACCC GAAAAAGCTG GCGAGCGTGT TGAAACCTCA CGTGGATTGC 
GTGTTTATCG ACGACATGCA CTATCGATGG CGTGTGAAGG ATTTTTACGA AAAACTAGGG 
TTTTCCTGGG CACTTGAGAA TGAGTACTTC GAAAGAACTC GAAAAGAACT ACTTGAACTC 
TTTCAATAA 

 

Protein sequence

MRVKEINVKS ALTYSESKRR YTLSPYVGCT NACVYCYASD YARRYREMNW KSEIIVKRNI 
AEVLRKDIIK KKPHHVFMST MCDPYQPIEK EYKLTRRCLE VFLEFPLLEI EVMILTKSTL 
VLRDLDLFKK MRRISVGLSV TTDDDEIRKM FEPNASSIEE RVEVLKVLKE NGIRTCVFIS 
PMLPMNPKKL ASVLKPHVDC VFIDDMHYRW RVKDFYEKLG FSWALENEYF ERTRKELLEL 
FQ