| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0684 |
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| Symbol | |
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| ID | 6092101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 703945 |
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| End bp | 704664 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642487870 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001738720 |
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| Protein GI | 170288482 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTGG ACAGGTATCT TTCGAATAGT GGTGTGGGAA CGAGAAAAGA AGTGAAAAAA
CTGATAAAAC AGGGCAGGGT GACCGTTAAC GGGAGAGTAG TGCTCGATCC TGGACATCCT
GTGTTGGAGA ACGACGCAGT TGCGCTCGAT GGTGAGGTGG TGAGATTTCA CAAAAAGGTT
TACATTCTCT TCTACAAGCC TTCAGGATAC GTGACCAGCA CGAAAGATCC ACATTCGGAA
ACCATCATGG AATTTCTCCC TCCATTGAAA GGAATTTTCC CCGTTGGAAG ACTCGACAAA
GATGCCGAAG GTCTCCTGAT AATAACGAAC GATGGTGATT TCGCTCATCG TGTGATTTCA
CCGAAATGGT CTGTAGAAAA AGAGTACATT GTGAAGGTAG AAGGAGAAGT CACAGAAGAC
AAGATAGAAA AGTTGAAAAA TGGTGTGACT TTAAGGGATG GTTTTTTCGC GAAGGCAAAG
TGCGTGGAGA AGCTGTCGAA CGACACGTTG AAGATAGTTA TAACGGAGGG TAAGTATCAT
CAGATCAAAC GAATGACAGC CGCTGTGGGT CTAAAAACAG TGCACTTGAA GAGAACAAGA
ATCGGTGGAC TCGTTTTACC CGATGACATG AAACCTGGAG AGTACAGATT CTTGAGTGAA
GAGGAGGTGA AGAAGGTTTT TGAAAGAGAA GATCAGAAAG AAGATACTCC TCGCTTCTGA
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| Protein sequence | MRLDRYLSNS GVGTRKEVKK LIKQGRVTVN GRVVLDPGHP VLENDAVALD GEVVRFHKKV
YILFYKPSGY VTSTKDPHSE TIMEFLPPLK GIFPVGRLDK DAEGLLIITN DGDFAHRVIS
PKWSVEKEYI VKVEGEVTED KIEKLKNGVT LRDGFFAKAK CVEKLSNDTL KIVITEGKYH
QIKRMTAAVG LKTVHLKRTR IGGLVLPDDM KPGEYRFLSE EEVKKVFERE DQKEDTPRF
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