| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0669 |
|---|
| Symbol | |
|---|
| ID | 6092086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 684657 |
|---|
| End bp | 685508 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642487855 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001738705 |
|---|
| Protein GI | 170288467 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.586722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCCTGACAAT TGTGAGATAC ATCCTGATCG CCGTTTGTTT GATATTTTTC
CTTTTTCCCG TTTACTGGCT TGTGATCACG GCCTTTAAGC CTTCAGACGA GTGGTTCACC
ATGCCTCCTA GATTCTTTCC GACAAAGCCC ACGCTTGCTA ATTTCTTTGG AGCAAAAGAG
ACAGAAGTTT TCGGTGGAAC AACTGGTTCT ATTGAGAACA TCTTTCCGTA CTTGAGAAAC
AGTATCGTGG TTGGTGTATC TGTAGCACTT ATAGGAACGG TAATCAGTGC CCTCGCTGCC
TATGCTATTG CCCGATACAA GGTAGGAGGT CCATTCCTGG CAGAGTGGAT CATCTCCATC
AGAATGCTCC CACCTATTGT GTCAGCCGTT CCCCTGTACG TGATATTCAC GAAACTGAGA
CTCATCAACA CCTGGTGGGC TCTCATTCTG TCCCATCTTG TCATAGTTGT GCCTCTCGGG
GTCTGGCTTC TTATCAGCTT TTTCAGAGAG ATTCCAAGAG AGATAGATGA AGCGGCCTAT
GTAGATGGGG CTACTCCTTT TCAAACGTTC TTCTATGTGG TTCTTCCGCT CAGTGCCCCA
GGACTCGCAG CGGTCGCAGT GCTTTCTCTC ATTCAAAGCT GGGGAGAGTT CCTTCTGGCC
CTTGTTTTAA CGAACGATGC ACGTGCTCAA ACGCTACCCA TTTTCCTTGG AAGATACATC
ACTGGATGGA GGGTTGCATG GGGACCACTT TCCGCGGCCG GTATAGTCAC AATGCTTCCC
GTTGTGGTCT TTGCTCTTAT TGCCCAGAGG TATCTAATCA GAGGACTCAC CTTCGGAGCG
GTGAAAGGAT AG
|
|---|
| Protein sequence | MKKILTIVRY ILIAVCLIFF LFPVYWLVIT AFKPSDEWFT MPPRFFPTKP TLANFFGAKE
TEVFGGTTGS IENIFPYLRN SIVVGVSVAL IGTVISALAA YAIARYKVGG PFLAEWIISI
RMLPPIVSAV PLYVIFTKLR LINTWWALIL SHLVIVVPLG VWLLISFFRE IPREIDEAAY
VDGATPFQTF FYVVLPLSAP GLAAVAVLSL IQSWGEFLLA LVLTNDARAQ TLPIFLGRYI
TGWRVAWGPL SAAGIVTMLP VVVFALIAQR YLIRGLTFGA VKG
|
|---|
| |