Gene TRQ2_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0580 
Symbol 
ID6091996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp585647 
End bp586633 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content44% 
IMG OID642487766 
Productouter membrane protein-like protein 
Protein accessionYP_001738617 
Protein GI170288379 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC TCTTCGTGGC GCTGTTGTCT CTCGTTTCTG TGCTGAGCTT TTCTGTTTCT 
CTGAATGATG TTCTTCAAAC CGCTCTTGCA AGCAGTACAG ATTATCAAAT CGCGCAGATC
AACTTAGAAT CCGCGACGAT GGACTACGAA AAAGCAAAAC TCGAAGCAAC GAACAAGAGA
TCAGAACTCT CCGCAGAACT CAGCTACTAC AACAACCTTC AAAGCTACAG AAACTCGCTG
AAATCCGCTT ATCAAGATGT TCTGGGAAGG ATTTTCAATC TCCTGACCGC TGACCTTTCC
TACGAAATCG CACAGCTGAA CTTCGAAAAC GCCCAGGAAG ACTACAAAAC CAGTCAGGAG
CTTTTCAAGA AGAATCTCAT TTCCGAGAAC GACCTGAAAG ATTCAGAGCT CACCCTCGAA
GAAGCCAGCA ACAACCTCCT TTCCGCCCAA AAAGACCTTG AAGAAGCCCA AAAAGATTAT
GAGGAGATCT TCAGCGTGGA AGTGAGTGAA ATAGAGCTTC CTCTCATCGA TTATCAGAAC
CTTGTGAGTG AAGACGAATA CCTCGACAAT CTTTCTTCCG TCAAGATCGC GGAGCTGAAC
ATGAAGATCG CTGAATACGA TCTCAACAAC CTCTCCGCTT CCGCTTCGAA GTACGAACAG
AAAAAGGCAG AGCTGAATTA CAAGAAATCA AAGATGAACT ACGACGAAGC TTTGAAAGAA
GCAAAAGACA GCTATAAGAG CACCCTCGAT TCTCTGGAAA TCGCCTTCTT GAATTTGAAA
GTACTGAAAG AAAAGGTTGA CCTCAACGAG AACATCCTCA AAGATTACCA GGAAAGATAC
GAAAAGGGAC TGATCTCAAA GAAAGAACTG AACACCCAGA AGATCAATCT TCTCAACACC
AAAAAGAACT ACTTCAATTC GCTACGCAGC TACTACACTT CGATCGTGAA CTTCCTGATA
GACGCTGGAA AAGAAGTCTC CTTTTGA
 
Protein sequence
MKNLFVALLS LVSVLSFSVS LNDVLQTALA SSTDYQIAQI NLESATMDYE KAKLEATNKR 
SELSAELSYY NNLQSYRNSL KSAYQDVLGR IFNLLTADLS YEIAQLNFEN AQEDYKTSQE
LFKKNLISEN DLKDSELTLE EASNNLLSAQ KDLEEAQKDY EEIFSVEVSE IELPLIDYQN
LVSEDEYLDN LSSVKIAELN MKIAEYDLNN LSASASKYEQ KKAELNYKKS KMNYDEALKE
AKDSYKSTLD SLEIAFLNLK VLKEKVDLNE NILKDYQERY EKGLISKKEL NTQKINLLNT
KKNYFNSLRS YYTSIVNFLI DAGKEVSF