Gene TRQ2_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0482 
Symbol 
ID6091892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp477648 
End bp478709 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content44% 
IMG OID642487664 
ProductNusG antitermination factor 
Protein accessionYP_001738521 
Protein GI170288283 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000917013 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA AGTGGTACAT AGTCCTTACT ATGTCCGGTT ACGAGGAAAA GGTTAAAGAA 
AATATCGAAA AGAAAGTCGA AGCCACCGGG ATAAAAAATC TGGTGGGCCG TATTGTTATT
CCTGAAGAGG TAGTTTTGGA CGCCACCAGC CCTTCCGAGA GGCTCATACT TTCTCCGAAG
GCCAAATTAC ATGTGAACAA TGGAAAAGAT GTTAACAAAG GGGATTTGAT AGCTGAAGAA
CCTCCTATTT ATGCTCGAAG AAGCGGTGTG ATCGTTGACG TGAAGAACGT CAGAAAGATT
GTTGTGGAAA CCATCGATAG GAAGTATACG AAGACGTATT ACATTCCCGA GTCTGCGGGA
ATCGAGCCGG GTTTGAGGGT TGGAACGAAA GTGAAGCAGG GACTGCCGCT TTCGAAAAAC
GAAGAGTACA TCTGTGAACT GGATGGAAAG ATCGTTGAGA TAGAACGAAT GAAAAAAGTG
GTCGTTCAGA CACCCGATGG TGAGCAGGAC GTTTATTACA TTCCTTTGGA TGTTTTCGAC
AGGGATAGGA TAAAAAAAGG AAAAGAAGTG AAACAGGGGG AAATGCTTGC GGAAGCCAGG
AAGTTCTTCG CCAAGGTTTC GGGAAGAGTC GAAGTGGTGG ATTATTCAAC AAGAAAAGAG
ATCAGAATCT ACAAGACGAA AAGAAGAAAA CTCTTCCCGG GTTATGTGTT CGTGGAAATG
ATCATGAACG ATGAGGCCTA CAATTTCGTT CGTTCCGTGC CATACGTTAT GGGGTTTGTT
AGTTCAGGTG GACAACCTAT TCCCGTAAAA GACAGAGAAA TGAGACCTAT TTTGAGACTC
GCGGGCCTCG AAGAGTATGA AGAGAAGAAG AAACCTGTGA AGGTCGAACT CGGTTTCAAG
GTTGGAGACA TGGTGAAGAT AATAAGCGGT CCCTTCGAAG ATTTTGCGGG TGTTATAAAG
GAAATCGATC CAGAGAGACA GGAATTGAAA GTAAACGTAA CTATATTCGG ACGTGAAACT
CCTGTTGTTC TTCATGTTTC TGAAGTGGAG AAAATCGAGT GA
 
Protein sequence
MKKKWYIVLT MSGYEEKVKE NIEKKVEATG IKNLVGRIVI PEEVVLDATS PSERLILSPK 
AKLHVNNGKD VNKGDLIAEE PPIYARRSGV IVDVKNVRKI VVETIDRKYT KTYYIPESAG
IEPGLRVGTK VKQGLPLSKN EEYICELDGK IVEIERMKKV VVQTPDGEQD VYYIPLDVFD
RDRIKKGKEV KQGEMLAEAR KFFAKVSGRV EVVDYSTRKE IRIYKTKRRK LFPGYVFVEM
IMNDEAYNFV RSVPYVMGFV SSGGQPIPVK DREMRPILRL AGLEEYEEKK KPVKVELGFK
VGDMVKIISG PFEDFAGVIK EIDPERQELK VNVTIFGRET PVVLHVSEVE KIE