Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0417 |
Symbol | mnmA |
ID | 6091822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 406795 |
End bp | 407871 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642487595 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001738456 |
Protein GI | 170288218 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000611049 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGTAG GTGTGGCTCT GAGTGGCGGC GTGGACAGTG CTGTTGCCCT GTATCTTCTT CTCAAAGAAG GACACGAGGT GAAGGCATTC CACATGAAAA CAAAAGAAGA CGAGTTCTTC CTGAAAAAAG AGATAAAAAA GAAGGTCTGT TGCAGTCCCT CTGACACAGC CGATGCGATA AGGATCGCTC GCTCTCTGGG CGTGGAAATA GAGATCGTCG ATGTGAGAGA AGTCTTCAGA GAAAAGGTCA TAGAACCTTT CAAGAGGGAT CTGCTCAGAG GACTCACTCC CAATCCCTGC GTCCATTGCA ACAGGTATGT GAAGTTTGGA TACTTCATGG ACTACGTACT TTCGCAAGGA TTCGACGCTT TCGCAAGCGG GCATTATGCG CGTGTTGAGT TCAGTGGCAA ATACGGAAAA AAGGTAATAA AGAAGGGCGT GGACGGAAAA AAAGATCAAT CGTATTTCCT TGCCAGGATA GAACCCTGGA GGATAGAGAA ACTTCTCTTT CCAAACGGCA TCTACACGAA GGAAGAGATC AGGAGAATCG CAGAAGAGGC CGGTATACAC GTGGCAAAGA AACAGGAAAG CCAGGACGTG TGTTTCATAC CGGATGGAAG CATCGAAAAC TTTCTGAAAG ATGAAGGAAT AACCCTTTCA GAAGGAAAGG TGATCACAGA AAAAGGCGAA GTCGTCGGAC ACCACAGAGG TTATCCACTC TACACGGTCG GCCAGAGGAA AGGACTGAAG ATAGAAAAGT TCGGTGAAAG ACTTTACGTG AGAGAGAAGA TACCAGAAAG CAACGTCGTT GTGGTCTCTG GTCTGGAAGA TGTTTTCTTC TCCGGTTTGA TCGCAGAAGA TCCTGTCTGG CATGTTGAAG TGCCGGAAGA GTTCAGATGC GTCTGCAGGG TGAGGAAAAA ATCGGAAGAA GCCCCCGCAG TTGTCAGGGT AAGAGATAAC GAAGTGGAGG TCAGGTTCGA GAAGAAGGTC TTTGCCGTCA CACCGGGCCA GATCGCTGCC TTCTACGACG AAGACACACT CCTTGGAGGA GCGATCATAA AGGAGGGAAT CCGATGA
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Protein sequence | MKVGVALSGG VDSAVALYLL LKEGHEVKAF HMKTKEDEFF LKKEIKKKVC CSPSDTADAI RIARSLGVEI EIVDVREVFR EKVIEPFKRD LLRGLTPNPC VHCNRYVKFG YFMDYVLSQG FDAFASGHYA RVEFSGKYGK KVIKKGVDGK KDQSYFLARI EPWRIEKLLF PNGIYTKEEI RRIAEEAGIH VAKKQESQDV CFIPDGSIEN FLKDEGITLS EGKVITEKGE VVGHHRGYPL YTVGQRKGLK IEKFGERLYV REKIPESNVV VVSGLEDVFF SGLIAEDPVW HVEVPEEFRC VCRVRKKSEE APAVVRVRDN EVEVRFEKKV FAVTPGQIAA FYDEDTLLGG AIIKEGIR
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