Gene TRQ2_0382 details

Gene Information

• Locus tag: TRQ2_0382
• Symbol: leuD
• ID: 6091787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 369089
• End bp: 369583
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642487560
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_001738421
• Protein GI: 170288183
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02084] 3-isopropylmalate dehydratase, small subunit; [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGATAA AGGGAAAGGT TTTCGTTTTT GGGGACAACG TGAACACGGA CGAGATCATA 
CCGGCTAGGT ACCTCAACAC TTCTGACCCT CAGGAACTCG CAAAATACTG TATGGAGGAC 
GCGAGACCCG GCTTTGGAAG ACGAGACGAT ATAAAAGGAT CGATCATCGT GGCAGGAGAG 
AACTTCGGAT GCGGTTCCTC GAGGGAACAC GCTCCCGTTG CCATAAAGGC GGCTGGAATC 
TCCTGTGTCA TAGCCAAGTC TTTTGCAAGG ATTTTCTTCA GGAACGCTAT AAACATCGGT 
CTCCCCATCG TCGAACTGAA AGAAGCCGAC GAATTCGAAG AGGGTGACGT AGCAGAGGTG 
GATCTGGAAA ACGGAGTGGT GAGGAATCTC ACGAAAGGGA AAGAGTACAG AATAAGACCA 
TATCCTGAGT TTCTCATGAA GATCATGGAA GCGGGTGGAT GGCTTGAATA CTGTCTCAAA 
GAAGTGGGGG AGTGA 

 

Protein sequence

MKIKGKVFVF GDNVNTDEII PARYLNTSDP QELAKYCMED ARPGFGRRDD IKGSIIVAGE 
NFGCGSSREH APVAIKAAGI SCVIAKSFAR IFFRNAINIG LPIVELKEAD EFEEGDVAEV 
DLENGVVRNL TKGKEYRIRP YPEFLMKIME AGGWLEYCLK EVGE