Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0198 |
Symbol | |
ID | 6091601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 190766 |
End bp | 192910 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642487379 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001738241 |
Protein GI | 170288003 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCAATC GAACAGAGAT CGAAACGGAA GCGAAAGTGG TAATCAGAGA GCTGGAAAGT CTCAAAAAAA AGAGCTTCAC AAGAGAGGAG AAGAAACTCC TCATAAAGGC TTATGAGTTT GCTCGAATCG TGCATGAAGG TCAAAAGAGA TTCTCCGGAG AGCCATTCAT AACTCATCCC GTCGAAGTCA CGAAAATCCT TGCGGGTCTG GGTGTTGATG TAACGACTCT GGTCGCAGCC CTTCTGCACG ATGTCGTTGA AGACGGCGAA AATGTCAGTC TTGATCAAAT AAAGAAAGAA TTTGGGCCTG AGGTGGCCAG GATCGTGGAT GGTGTCACCA AGGTCAGCAG CATAAACGCA CCGATCGGTC GTGATCAAGA CTCTCGCAAG AAGATAGAGA CCATACAAAA AATGTTCTTT GCGATGGCAG AAGACATGAG AGTTATATTC GTAAAACTCG CTGACCGTCT TCACAACATG CGCACTATTC ACTACGTTCA AGATCAGGAA AAGAAGAGGT ACAAGGCTTA CGAAACCCTC GAGATCTACG CACCTCTGGC TCATAAGCTT GGAATCTACT CGATAAAGTC TGAACTCGAA GACTTGGCTT TCAAAGTGCT GTATCCGGAG GAATATTACA AGATAAAGAA ACTCGTCGCT GAAAAGAGAA AAGAGAGAGA AAAGAGAACC AATGAATACA TCTCCCTTCT CAAAAGTGCT TTGGAAGAGC ACAAGATAAA AGCGATTGTG GAGGGAAGGT ACAAGCATTA TTACAGCATA TGGAGGAAAA TGAGGGAAAA AGGGAAAAAA TTCGAAGAAA TCTACGATTT GATCGCCCTG AGGGTGATAG TGAAGGACGT GACCACCTGT TACACAGTTC TGGGGATCGT TCACAACATC TGGAAACCAC TTCCGGGAAG GTTCAAAGAT TACATCGCTG CGCCGAAGTC GAACGGTTAC CGCTCGCTCC ACACAACTGT GATAACAGGT TACGGCGAAC CCCTTGAGAT ACAAATAAGA GATGAGGAGA TGCACAGAGA AGCCGAGTAC GGTTTGATCG CTCACTGGAT ATACAAAGAA AGGCCAGACG TGAAAACGGC AAAAGAATGG ATAGAGAGGC TTCTCGATTG GAGAAAAGAA CTCGCCCAGG GATTCACCGA GTTTGAAGAT ATCAAGAAAG AACTTCAGAT GGACGAGGTG TTTGTCTTCA CCCCAAAGGG AGATATTCTG CATCTTCCCA AAGGTTCCAC ACCAATTGAT TTCGCGTATG CGATACACAC AGAGATAGGG CATCACTACA GTGGAGCGAA AGTGAACGGA AAGATCGTTC CCATCGACTA TCAACTGAAA AACGGAGATG TTGTTGAAAT AATTGTCAAC AAGAACTCTC CGGGTCCTAG TGTCGACTGG TTGAAGTACG CCAAAACCCA CAGCGCACGA GCAAAAATCA GAAGATTTCT GAAGGAAAAA CTCGCGCCGG AACTTGTAGA AAGAGGAAAG GAAGTTCTCA GGAAGATCTG CCGAAAGCTC GGAAAATCTT TCGAAGAAGT GATGCAAACG GAAGGAATCA AAAGGTATTT GAACACGTAT CAGGAAAAAG ATTTCTTCAT GAGAATCGGA GAAGGCAGCA TCACTACACA GGATCTCATA GAAGCTATTC TGGGAAAAAA GATCGTTGTG AAAAAGCGAT CCACGAAGAA GAAGACGAGG ATACAGAATC TTGTGAAGGT AGATGGGATA GATAGCATAG AGTTCCACAT CGCGAAGTGC TGTCATCCGA TCATGGGCGA TCCCATAGTG GCTGTAGTGA GCAGAAGAGG CATGACTATA CACAGGAGGG ATTGTAGGAA CCTGAAGAAC ATGTCACAGG ACAGGATATT CCCAGCTGAA TGGAACCTTG AAACCTCAGA GATGTTCGAT GCGCACATAA GGGTGGTCCT CGATTCGGAA AAAAACCTTC CGAGTTTGAT AGATCGAATA ACGAACCTCG GTGCGGAATT CGTGGCCATG AAAACTTTGA AGTCAGAAGA ACCGCTCGTC GTACAAATTC ACATAAAAAT ATCTAACACT GTCGAACTCA CCGGCCTTCT CGACAGACTC AGATCTTACA GGTACGTTCT GGACGCGGAA AGGGTGGTGC AATGA
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Protein sequence | MINRTEIETE AKVVIRELES LKKKSFTREE KKLLIKAYEF ARIVHEGQKR FSGEPFITHP VEVTKILAGL GVDVTTLVAA LLHDVVEDGE NVSLDQIKKE FGPEVARIVD GVTKVSSINA PIGRDQDSRK KIETIQKMFF AMAEDMRVIF VKLADRLHNM RTIHYVQDQE KKRYKAYETL EIYAPLAHKL GIYSIKSELE DLAFKVLYPE EYYKIKKLVA EKRKEREKRT NEYISLLKSA LEEHKIKAIV EGRYKHYYSI WRKMREKGKK FEEIYDLIAL RVIVKDVTTC YTVLGIVHNI WKPLPGRFKD YIAAPKSNGY RSLHTTVITG YGEPLEIQIR DEEMHREAEY GLIAHWIYKE RPDVKTAKEW IERLLDWRKE LAQGFTEFED IKKELQMDEV FVFTPKGDIL HLPKGSTPID FAYAIHTEIG HHYSGAKVNG KIVPIDYQLK NGDVVEIIVN KNSPGPSVDW LKYAKTHSAR AKIRRFLKEK LAPELVERGK EVLRKICRKL GKSFEEVMQT EGIKRYLNTY QEKDFFMRIG EGSITTQDLI EAILGKKIVV KKRSTKKKTR IQNLVKVDGI DSIEFHIAKC CHPIMGDPIV AVVSRRGMTI HRRDCRNLKN MSQDRIFPAE WNLETSEMFD AHIRVVLDSE KNLPSLIDRI TNLGAEFVAM KTLKSEEPLV VQIHIKISNT VELTGLLDRL RSYRYVLDAE RVVQ
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