Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3823 |
Symbol | |
ID | 4074974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | - |
Start bp | 71798 |
End bp | 72151 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638004482 |
Product | hypothetical protein |
Protein accession | YP_611217 |
Protein GI | 99077958 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.384447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0333069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGG ACATCGAAGC ACCAAATGTG GTTACGGAAG CACGTTTCCG CGAACTCGTG GAAAGCGGCT ATAGCGCTGA AATCCTCTGC CAAGAGTCGG CACATAAGAA GGGCCCGAGT TACTACGGGG TTTGGATTAT GCGCGCCGTC TCTGACGAGG GCATTGAAAA GCTTCTCGTC ACTGCCCGTA CTCGCACGAC CTACAACGAC ATCAAGATCC GTGAGTTTAA AACCATCACG GGCGTGGTCT CTTTCCTCAT TGGCATTGGC TTCTCCCATG CCGATGTCCC GCTCGAAGAA GGCCAGCGGA CAACACACAA GCTGGCTGCG ACCGACAAAG GCGGCAGCAA GTAG
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Protein sequence | MNWDIEAPNV VTEARFRELV ESGYSAEILC QESAHKKGPS YYGVWIMRAV SDEGIEKLLV TARTRTTYND IKIREFKTIT GVVSFLIGIG FSHADVPLEE GQRTTHKLAA TDKGGSK
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