Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3807 |
Symbol | |
ID | 4074958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | + |
Start bp | 58658 |
End bp | 59440 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638004466 |
Product | hypothetical protein |
Protein accession | YP_611201 |
Protein GI | 99077942 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTCA ATCGGGCTCT TGCGACAACC GTCGCATTGA TATTGTCGCA TAGCGCAGTG TCTGCCGCAG ATCTGGCAAT TATCGGTGGT GCTAACTTCT CCCAGTCCTC CGCACAAATC CGCGCAACTT TTGAGGCGGA GGGCTATCGC TGTGAACGCA TGGGCGTCAT GGATCCTGAC GATGGAAAAC TCGATGAAAA AGGCTGCGCA CTTTGGAAGG ACGAGTTTTC CTTTTCTAGC TCGGATACGC GCGTGATGTG GACGATGCGC TATCAAAAAG ACAACGAGAT GCGGATCCTC GTCCTTGGAG AGCAGCAAGG CCTGGATCGC GTGTTGATGC TTGGCCAGGC CACGTTTTTC GAAGATGCGG CTATCGAGAT GTCCTCCTCG GAATTCCTAG AGGATAGGCT TGCTGTATTC TTCGAGGTCA CACCGACATT CGGCACCTTC GATACCTCTG AGGATGCGTT AGATCTGTGC TTCCTGATGA CGGAGGATAT AACTGTCCTG ACCCCTGCGG GCTTGCCGAG TTCTGCATTG GAGGAAAACC AGAGGTTTCT TGGCTCTCCA ATCAGTCCGG CAGCCATCCT CTGCGAACGT TGGATGAACC GGAAACGCGA TGCGGTTGTC GATTTTGCCC GATCAGATGC AGGTCCAGCT TATGCGCGTA AGGTCGTGTA TTACGCCGAC GGCGGTAAAC CTCAACAGTA CATGGACATG CTGTGGAATG TTCCGGCAGT GGTGGGTTGG AGCCTAGCCC CCCTTCAGGT CGAGGGTAAA TAG
|
Protein sequence | MAFNRALATT VALILSHSAV SAADLAIIGG ANFSQSSAQI RATFEAEGYR CERMGVMDPD DGKLDEKGCA LWKDEFSFSS SDTRVMWTMR YQKDNEMRIL VLGEQQGLDR VLMLGQATFF EDAAIEMSSS EFLEDRLAVF FEVTPTFGTF DTSEDALDLC FLMTEDITVL TPAGLPSSAL EENQRFLGSP ISPAAILCER WMNRKRDAVV DFARSDAGPA YARKVVYYAD GGKPQQYMDM LWNVPAVVGW SLAPLQVEGK
|
| |