Gene TM1040_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3738 
Symbol 
ID4075445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp796938 
End bp797849 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content62% 
IMG OID638005258 
Producthypothetical protein 
Protein accessionYP_611967 
Protein GI99078709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTC CTCGCGCTAC TGCAGTCGGA TTTGTTGCCG TTCTTCTGTG GGCGCTTCTG 
GCGCTCTTGA CGTTCGGTTC CAGCCCAACG CCCCCCCTGC TTCTCAACAC CATCTGTTTC
ACCATCGGCG GCATCATCGG CCTGATCTGG GTGCAGATGA CGGGCAGCTG GGCAGAGCTC
AGACGAGTCC GGCTTAGGGT CTATGCCTTC GGATCGATCG GTGTCTTTGG CTATCACGCA
CTCTACTTTT CTGCCCTGCG CGCGGCGCCT GCGGCCGAGG CTGGCCTGAT TGCTTATCTC
TGGCCTTTGC TGATCGTCCT CTTGTCGGGC CTCCTACCCG GAGAGCGGTT GCGTGCGGGG
CATTTCATCG GCGCAGTTTT AGGGTTTGCC GGAGCGGCCT GCATTATCAC CGGTGGCGGT
GTCGGCTTTC AGGCGCAGTA TCTCCCGGGC TACGGTCTTG CACTGCTCTG CGCCCTCTTT
TGGTCCAGCT ACTCCGTCGG ATCTCGCCTC ATTGGGGACG CGCCGACGTC ATCGGTGGCT
GTGTTCTGCC TTTTGAGCGC TGTTGCTTCT GGCGCATTGC ATGTTCTGCT TGAGGACACC
ATCTGGCCTG CGAACTCGCT GGGGTGGGCC TCGGCGCTGT TGTTGGGCTT AGGTCCTGTG
GGGCTGGCCT TTTACGTTTG GGACATCGGG GTCAAGCAGG GGGACATCCA GATGCTTGGA
ACCAGCTCCT ATGCGGCGCC CTTGTTGTCG ACGTTGATTC TGGTGCTCGC CGGGATCGCC
GCCCCCACCT GGGGACTGGC ACTGGCGACT GTGTTGATCA CGGCAGGCGC CGTACTGGCA
GCGCGTGCCT CTGCCAAGGC CCCTGCGCAC ACCCTCGTCG AGGGGCAAAC CGTGACACCG
CCTGCCGGAT AA
 
Protein sequence
MTRPRATAVG FVAVLLWALL ALLTFGSSPT PPLLLNTICF TIGGIIGLIW VQMTGSWAEL 
RRVRLRVYAF GSIGVFGYHA LYFSALRAAP AAEAGLIAYL WPLLIVLLSG LLPGERLRAG
HFIGAVLGFA GAACIITGGG VGFQAQYLPG YGLALLCALF WSSYSVGSRL IGDAPTSSVA
VFCLLSAVAS GALHVLLEDT IWPANSLGWA SALLLGLGPV GLAFYVWDIG VKQGDIQMLG
TSSYAAPLLS TLILVLAGIA APTWGLALAT VLITAGAVLA ARASAKAPAH TLVEGQTVTP
PAG