| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3734 |
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| Symbol | |
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| ID | 4075441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 792143 |
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| End bp | 792982 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005254 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_611963 |
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| Protein GI | 99078705 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.588973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAAAC GGCATTTCTG GAAAAACGAC ATCCCGGAAG GGGCAGAAAA CCCGCTATCG
GCCGCCATCG TGGCGCGCGA TCGCAATGTT GTGGATATGG TGGCAGAGGC CGTACGACAC
GATCAAACCC TCCTCGCCTA CCAGCCCGTT GTGCAAAGCC GCGCGCCCGA CGCGATTGCC
TTTTACGAGG GCTACATCCG CGTAATGGAC GCCACCGGCC GCATCATCCC CGCGCGCGAA
TTCATGAGCG TGATTGAGGA TCGCGAACTG GGGCGCAAAC TCGACTGCCT TGCGCTTGAA
CAAGGGCTGC GCGTTCTGCA GCGCAATCCC AATATCCGCC TCTCGATCAA CATGTCCGCC
CGCTCTATCG GCTACAGCCA GTGGAACAAG GTTCTGGAAC GGTTTCTTGA GCGCGATCAG
TTCCTAGGCG AGCGACTGGT GCTGGAAATT TCCGAAGCCT CTGCCATGGC GACACCCGAA
CTCGTGATCG ACTTTATGGA CCAGATGCAG CAGCACGGCA TTGCCTTTGC GCTCGACAAC
TTCGGGGCTG GCACCACTGC CATCGGCCAC TTCCGTGACT TCTTTTTTGA TGCGGTGAAG
ATCGATGGCC AATATGTGCG TGGGGTTCAC GCCAGTCACG ACAATCAGGC GGTCATCAAG
GCGCTGATCG CCATTGCCAA GCAGTTCGAC ATGTTCATCG TGGCGGAGTC GGTTGAACGG
CAGGAGGATG CCGACTTCCT TATCGAGGCC GGGGTCGATT GCCTGCAGGG GTTTCTCTAC
GGCGCGCCAA CCATTTCACC GCCCTGGCAG AACGAAAACG ATTCGCGCGC CCGCGCCTGA
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| Protein sequence | MKKRHFWKND IPEGAENPLS AAIVARDRNV VDMVAEAVRH DQTLLAYQPV VQSRAPDAIA
FYEGYIRVMD ATGRIIPARE FMSVIEDREL GRKLDCLALE QGLRVLQRNP NIRLSINMSA
RSIGYSQWNK VLERFLERDQ FLGERLVLEI SEASAMATPE LVIDFMDQMQ QHGIAFALDN
FGAGTTAIGH FRDFFFDAVK IDGQYVRGVH ASHDNQAVIK ALIAIAKQFD MFIVAESVER
QEDADFLIEA GVDCLQGFLY GAPTISPPWQ NENDSRARA
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