Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3631 |
Symbol | |
ID | 4075058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 689022 |
End bp | 689693 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638005150 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_611860 |
Protein GI | 99078602 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.232474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTGGA ATTTGCCCAA TATCCTCACG GTCCTGCGGC TGCTGGCAGC GCCAGCGCTG GCGGTGATGT TTCTGTTTTT CAGTCGCCCT CATGCGGATT GGTTTGCGCT GGTTTTATTT GTGGGGGCGG CGATCACCGA TTGGTTCGAC GGTTATCTGG CCCGCAGCTG GAAGCAGGAA ACCAAGATGG GCGCTATGCT CGACCCAATC GCGGACAAGG CGATGGTGGT GATCGCGCTC ATGATCCTCG TGGGATACTC GACCTCGCAT TGGACGGCCT GGCTGGTTCT ACCCGCCACC GTGATCCTGT TTCGAGAGGT ATTTGTGTCC GGCCTCAGGG AGTATCTGGG CGACACGGCA GGCTCTCTCA AAGTCACCAA ACTCGCCAAG TGGAAAACGA CGGCGCAGAT GATCGCGATT GCAACATTAT TTTCACAGGG CATATTTGAG CACCACCTCG GCATGGGTGG GTTTGGCATG GATGCGCAGA TGGTCAATGA TGTGCTCAGC GGGGTCATCG AGGACACGCA GGGGCTCAGG TTCTACTTCG AGGGCATGAT TTGGTCGGGC CGTATCGGCC TGTGGCTGCT CTGGATCGCG GCGGCCCTGA CGCTCATCAC CGGGTTTGAT TATCTGAAAA AGGCTCTGCC ATATCTGAAG GAGACGCGCT GA
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Protein sequence | MIWNLPNILT VLRLLAAPAL AVMFLFFSRP HADWFALVLF VGAAITDWFD GYLARSWKQE TKMGAMLDPI ADKAMVVIAL MILVGYSTSH WTAWLVLPAT VILFREVFVS GLREYLGDTA GSLKVTKLAK WKTTAQMIAI ATLFSQGIFE HHLGMGGFGM DAQMVNDVLS GVIEDTQGLR FYFEGMIWSG RIGLWLLWIA AALTLITGFD YLKKALPYLK ETR
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