| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3617 |
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| Symbol | |
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| ID | 4075044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 671764 |
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| End bp | 672813 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005136 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_611846 |
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| Protein GI | 99078588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.732066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0126884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACT TTAACCTTCC CAAATCAAAA GCCTTCGAAG CCCTAAGCAA AACAGCCCAA
GAGCGTATCT TGATCCTCGA TGGAGCGATG GGGACACAGA TACAAAAGCT GGGCCTCGAC
GAAGAAGCCT TTCGCGGCCA CGGGGGACAT TCCTGTGCGT TTCACTCCAA CCATCCGCAG
CAGGGTAACA ATGATCTCTT GATATTGACC CAACCCGAGG CGGTTGAGCA GATCCACTAT
GACTTTGCGA TGGCTGGGGC CGACATCGTC GAAACCAATA CGTTTTCCTC CACCACGATC
GCTCAGGCCG ATTACGCACT TGAGGATGCG GTGCATGATC TCAACGCCGA GGGCGCGCGG
GTGGCGCGCC GTGCGATGGA TCGTGCAACG GCCGAAGATG GCAAACAACG CTGGGTGGCC
GGCGCGGTCG GGCCCACCAA CCGGACGGCG TCGATCAGTC CTGATGTGAA TGATCCGGGC
TACCGGGCGG TCACCTTTGA TGATTTGCGG GTGGCCTATG GTCAGCAGAT TCGAGGTTTG
ATCGCCGGTG GCGCTGATCT GATCCTGATT GAGACAATCT TTGACACGCT CAACGCCAAA
GCGGCGGTAT TCGCCTGTTT TGAGGCCTTT GCAGAACATG GTGAGCGCTT GCCGATCATG
ATTTCCGGAA CCATCACAGA TGCTTCTGGT CGCACGCTCT CAGGGCAGAC TCCGACGGCG
TTCTGGCACT CTGTTCGCCA TGCGCGCCCC TTCACCGTTG GGCTTAATTG TGCCCTTGGC
GCGGATGCCA TGCGCCCGCA CCTGACCGAG TTGGCCGGTG TCGCCGATAC TCTGGTCTGT
GCCTATCCAA ACGCGGGACT GCCAAATGCC TTTGGTCAAT ACGACGAAGA GCCAGAAGAC
ACTGCCGCAA AGGTAGAGAT CTTTGCCAAG GAGGGGCTGG TAAACGTGGT TGGCGGCTGT
TGCGGCACTA CGCCGGAGCA CATCCGCGCT ATTGCGGAAC AAGTCGCACC CTACGCTCCA
CGTCGCATCC GGGAGGCTGC AAATGTCTGA
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| Protein sequence | MQNFNLPKSK AFEALSKTAQ ERILILDGAM GTQIQKLGLD EEAFRGHGGH SCAFHSNHPQ
QGNNDLLILT QPEAVEQIHY DFAMAGADIV ETNTFSSTTI AQADYALEDA VHDLNAEGAR
VARRAMDRAT AEDGKQRWVA GAVGPTNRTA SISPDVNDPG YRAVTFDDLR VAYGQQIRGL
IAGGADLILI ETIFDTLNAK AAVFACFEAF AEHGERLPIM ISGTITDASG RTLSGQTPTA
FWHSVRHARP FTVGLNCALG ADAMRPHLTE LAGVADTLVC AYPNAGLPNA FGQYDEEPED
TAAKVEIFAK EGLVNVVGGC CGTTPEHIRA IAEQVAPYAP RRIREAANV
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